miRBase entry: pca-mir-124

Stem-loop pca-mir-124


Accession
MI0037585
Description
Polistes canadensis pca-mir-124 precursor miRNA


Sequence

agagaggauuugugagucugugcuccuUGCGUUCACUGCGGGCUUCCAUGugccaacuuuucaaaauucaUAAGGCACGCGGUGAAUGCCaagagcggaccaaauucagc
.....(((((((...((((..((((...((((((((((((.((((..(((..................))).)))).))))))))))))...)))))))))))))))...

Structure
agaga       uga    gu    cuU            G    CC   ugccaacu 
     ggauuug   gucu  gcuc   GCGUUCACUGCG GCUU  AUG        u
     |||||||   ||||  ||||   |||||||||||| ||||  |||         
     cuuaaac   cagg  cgag   CGUAAGUGGCGC CGGA  Uac        u
--cga       ---    --    aaC            A    -A   uuaaaacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-miR-124-5p

Accession MIMAT0045863
Description Polistes canadensis pca-miR-124-5p mature miRNA
Sequence 28 - UGCGUUCACUGCGGGCUUCCAUG - 50
Evidence experimental
Illumina [1]

Mature pca-miR-124-3p

Accession MIMAT0045864
Description Polistes canadensis pca-miR-124-3p mature miRNA
Sequence 71 - UAAGGCACGCGGUGAAUGCC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975