Stem-loop gmo-mir-11937

Accession

MI0038008

Description

Gadus morhua gmo-mir-11937 precursor miRNA

Sequence

CGAAGACCGCGACGUCUGGCCUggacacacuugacgugucgccguGCCAGACGUCACGUUCUUCAGA
.(((((.((.((((((((((.(((..((((.....))))..))).)))))))))).)).)))))...

Structure

--C     C  C          C   ac    u 
   GAAGA CG GACGUCUGGC Ugg  acac u
   ||||| || |||||||||| |||  |||| g
   CUUCU GC CUGCAGACCG gcc  ugug a
AGA     U  A          u   gc    c 

Annotation confidence Not enough data

Genome context

HE566600.1: 134379-134445 [+]

Mature gmo-miR-11937-5p

• Accession: MIMAT0046073
• Description: Gadus morhua gmo-miR-11937-5p mature miRNA
• Sequence: 1 - CGAAGACCGCGACGUCUGGCCU - 22
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-11937-3p

• Accession: MIMAT0046074
• Description: Gadus morhua gmo-miR-11937-3p mature miRNA
• Sequence: 46 - GCCAGACGUCACGUUCUUCAGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324