Stem-loop xla-mir-143

Accession

MI0038254

Description

Xenopus laevis xla-mir-143 precursor miRNA

Sequence

GGUGCAGUGCUGCAUCUCUGGUcaauugugagucUGAGAUGAAGCACUGUAGCUC
(.(((((((((.((((((.(((((....))).)).)))))).))))))))).)..

Structure

-- G         G      U  -   a 
  G UGCAGUGCU CAUCUC GG Uca u
  | ||||||||| |||||| || |||  
  C AUGUCACGA GUAGAG cu agu u
CU G         A      U  g   g 

Annotation confidence Not enough data

Genome context

chr3L: 26674090-26674144 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-143

Mature xla-miR-143-5p

• Accession: MIMAT0046456
• Description: Xenopus laevis xla-miR-143-5p mature miRNA
• Sequence: 1 - GGUGCAGUGCUGCAUCUCUGGU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-143-3p

• Accession: MIMAT0046457
• Description: Xenopus laevis xla-miR-143-3p mature miRNA
• Sequence: 35 - UGAGAUGAAGCACUGUAGCUC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38