Stem-loop xla-mir-15b

Accession

MI0038262

Description

Xenopus laevis xla-mir-15b precursor miRNA

Literature search

1 open access papers mention xla-mir-15b
(1 sentences)

Sequence

UAGCAGCACAUCAUGAUUUGCAugcuguauuagauuCUAAUCAUUAUUUGCUGCUUCA
.(((((((.((.((((((.(.(..(((...)))..)).)))))).)).)))))))...

Structure

--U       C  C      U C ug   u 
   AGCAGCA AU AUGAUU G A  cug  
   ||||||| || |||||| | |  ||| a
   UCGUCGU UA UACUAA C u  gau  
ACU       U  U      U - ua   u 

Annotation confidence Not enough data

Genome context

chr5S: 96781648-96781705 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-15b

Mature xla-miR-15b-5p

• Accession: MIMAT0046472
• Description: Xenopus laevis xla-miR-15b-5p mature miRNA
• Sequence: 1 - UAGCAGCACAUCAUGAUUUGCA - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-15b-3p

• Accession: MIMAT0046473
• Description: Xenopus laevis xla-miR-15b-3p mature miRNA
• Sequence: 37 - CUAAUCAUUAUUUGCUGCUUCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38