miRBase entry: xla-mir-191

Stem-loop xla-mir-191

Accession

MI0038279

Description

Xenopus laevis xla-mir-191 precursor miRNA

Sequence

CAACGGAAUCCCAAAAGCAGCUguuguggaaauguucagCUGCAGUUGGGACCCGUUCAC
.(((((..((((((..(((((((.............)))))))..)))))).)))))...

Structure

--C     AA      AA       uugug 
   AACGG  UCCCAA  GCAGCUg     g
   |||||  ||||||  |||||||     a
   UUGCC  AGGGUU  CGUCgac     a
CAC     -C      GA       uugua

Annotation confidence Not enough data

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Genome context

chr4S: 99615962-99616021 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-191

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature xla-miR-191-5p

Accession	MIMAT0046502
Description	Xenopus laevis xla-miR-191-5p mature miRNA
Sequence	1 - CAACGGAAUCCCAAAAGCAGCU - 22
Evidence	experimental Illumina [1]

Mature xla-miR-191-3p

Accession	MIMAT0046503
Description	Xenopus laevis xla-miR-191-3p mature miRNA
Sequence	40 - CUGCAGUUGGGACCCGUUCAC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26548531
Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
"Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
"Dev Biol (2016) 409:26-38