Stem-loop xla-mir-194-2

Accession

MI0038282

Description

Xenopus laevis xla-mir-194-2 precursor miRNA

Sequence

UGUAACAGCAACUCCAUGUGGAAguagauauaauauuCCGGUGGAGAUGCUGUUAUCUG
.(((((((((.((((((.(((((............))))))))))).)))))))))...

Structure

--U         A      G     guaga 
   GUAACAGCA CUCCAU UGGAA     u
   ||||||||| |||||| |||||      
   UAUUGUCGU GAGGUG GCCuu     a
GUC         A      -     auaau 

Annotation confidence Not enough data

Genome context

chr4L: 21825288-21825346 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-194-2

Mature xla-miR-194-5p

• Accession: MIMAT0046508
• Description: Xenopus laevis xla-miR-194-5p mature miRNA
• Sequence: 1 - UGUAACAGCAACUCCAUGUGGAA - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-194-3p

• Accession: MIMAT0046509
• Description: Xenopus laevis xla-miR-194-3p mature miRNA
• Sequence: 38 - CCGGUGGAGAUGCUGUUAUCUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38