Stem-loop xla-mir-210

Accession

MI0038294

Description

Xenopus laevis xla-mir-210 precursor miRNA

Sequence

AGCCACUGACUAACGCACAUUGcgcugcugcuaaaaugccaCUGUGCGUGUGACAGCGGCUAA
((((.(((.(..(((((((.((.((............)))).)))))))..).))).))))..

Structure

--    A   A UA       U  c  ugcug 
  AGCC CUG C  ACGCACA UG gc     c
  |||| ||| |  ||||||| || ||      
  UCGG GAC G  UGCGUGU ac cg     u
AA    C   A UG       C  -  uaaaa 

Annotation confidence Not enough data

Genome context

chr4L: 22477271-22477333 [-]

Mature xla-miR-210-5p

• Accession: MIMAT0046530
• Description: Xenopus laevis xla-miR-210-5p mature miRNA
• Sequence: 1 - AGCCACUGACUAACGCACAUUG - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-210-3p

• Accession: MIMAT0046531
• Description: Xenopus laevis xla-miR-210-3p mature miRNA
• Sequence: 42 - CUGUGCGUGUGACAGCGGCUAA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38