Stem-loop xla-mir-449

Accession

MI0038335

Description

Xenopus laevis xla-mir-449 precursor miRNA

Literature search

2 open access papers mention xla-mir-449
(4 sentences)

Sequence

AGGCAGUGUAAUGUUAGCUGGUuggaaaguaucagacacCGGUUAACUUACACCUGCCCCC
.((((((((((.((((((((((.(............)))))))))))))))).)))))...

Structure

--A     -     U          u gaaag 
   GGCAG UGUAA GUUAGCUGGU g     u
   ||||| ||||| |||||||||| |      
   CCGUC ACAUU CAAUUGGCca c     a
CCC     C     -          - agacu 

Annotation confidence Not enough data

Genome context

chr1S: 170602158-170602218 [+]

Mature xla-miR-449-5p

• Accession: MIMAT0046603
• Description: Xenopus laevis xla-miR-449-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAAUGUUAGCUGGU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-449-3p

• Accession: MIMAT0046604
• Description: Xenopus laevis xla-miR-449-3p mature miRNA
• Sequence: 40 - CGGUUAACUUACACCUGCCCCC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38