miRBase entry: mco-mir-71

Stem-loop mco-mir-71

Accession

MI0038512

Description

Mesocestoides corti mco-mir-71 precursor miRNA

Sequence

ugaaagacgaugguagugagaugcgguccuugcagccaUCUCCCUACUUCGCCUUUUCAUG
.(((((.(((.(((((.(((((((.((....)).).)))))).)))))))).)))))....

Structure

---u     a   u     u      - g  c 
    gaaag cga gguag gagaug c gu c
    ||||| ||| ||||| |||||| | ||  
    UUUUC GCU UCAUC CUCUac g cg u
GUAC     C   -     C      c a  u

Annotation confidence Not enough data

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Genome context

LM530374.1: 44026-44086 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mco-mir-71

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mco-miR-71-5p

Accession	MIMAT0046786
Description	Mesocestoides corti mco-miR-71-5p mature miRNA
Sequence	39 - UCUCCCUACUUCGCCUUUUCAUG - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 27544036
Identification and profiling of microRNAs in two developmental stages of the model cestode parasite Mesocestoides corti
"Basika T, Macchiaroli N, Cucher M, Espinola S, Kamenetzky L, Zaha A, Rosenzvit M, Ferreira HB"
"Mol Biochem Parasitol (2016) 210:37-49