miRBase entry: mco-mir-277

Stem-loop mco-mir-277

Accession

MI0038525

Description

Mesocestoides corti mco-mir-277 precursor miRNA

Sequence

AUGGGUAGAAAGUGCUUUUUUACAaucagaugcccuuaggacauccuuuuuuguuuguaaaugcauuuucuggcccguaa
(((((((((((((((...(((((((.((((((((....)).))))......)).))))))).))))))))).))))))..

Structure

--      -         UUU       u  ------    -  c 
  AUGGGU AGAAAGUGC   UUUACAa ca      gaug cc u
  |||||| |||||||||   ||||||| ||      |||| ||  
  ugcccg ucuuuuacg   aaauguu gu      cuac gg u
aa      g         --u       u  uuuuuc    a  a

Annotation confidence Not enough data

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Genome context

LM530945.1: 17675-17754 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mco-mir-277

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mco-miR-277-3p

Accession	MIMAT0046801
Description	Mesocestoides corti mco-miR-277-3p mature miRNA
Sequence	1 - AUGGGUAGAAAGUGCUUUUUUACA - 24
Evidence	experimental Illumina [1]

References

PubMed ID: 27544036
Identification and profiling of microRNAs in two developmental stages of the model cestode parasite Mesocestoides corti
"Basika T, Macchiaroli N, Cucher M, Espinola S, Kamenetzky L, Zaha A, Rosenzvit M, Ferreira HB"
"Mol Biochem Parasitol (2016) 210:37-49