miRBase entry: cpo-mir-15a

Stem-loop cpo-mir-15a

Accession

MI0038561

Description

Cavia porcellus cpo-mir-15a precursor miRNA

Sequence

UAGCAGCACAUAAUGGUUUGUGgauuuugaaaaggugCAGGCCAUAUUGUGCUGCCUCAaaaauacaa
..((((((((..((((((((((.............))))))))))..)))))))).............

Structure

-----------UA        UA          gauuu 
             GCAGCACA  AUGGUUUGUG     u
             ||||||||  ||||||||||     g
             CGUCGUGU  UACCGGACgu     a
aacauaaaaACUC        UA          ggaaa

Annotation confidence Not enough data

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Genome context

DS562861.1: 59875526-59875593 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-15a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-15a-5p

Accession	MIMAT0046849
Description	Cavia porcellus cpo-miR-15a-5p mature miRNA
Sequence	1 - UAGCAGCACAUAAUGGUUUGUG - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-15a-3p

Accession	MIMAT0046850
Description	Cavia porcellus cpo-miR-15a-3p mature miRNA
Sequence	38 - CAGGCCAUAUUGUGCUGCCUCA - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344