miRBase entry: cpo-mir-34b

Stem-loop cpo-mir-34b

Accession

MI0038601

Description

Cavia porcellus cpo-mir-34b precursor miRNA

Sequence

AGGCAGUGUAAUUAGCUGAUUGUgcuguugugcuuacAAUCACUAACUCCACUGCCAUC
.(((((((...((((.(((((((((......))..)))))))))))...)))))))...

Structure

--A       UAA    C       --  ug 
   GGCAGUG   UUAG UGAUUGU  gc  u
   |||||||   |||| |||||||  ||   
   CCGUCAC   AAUC ACUAAca  cg  u
CUA       CUC    -       uu  ug

Annotation confidence Not enough data

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Genome context

DS562874.1: 36239766-36239824 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-34b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-34b-5p

Accession	MIMAT0046924
Description	Cavia porcellus cpo-miR-34b-5p mature miRNA
Sequence	1 - AGGCAGUGUAAUUAGCUGAUUGU - 23
Evidence	experimental Illumina [1]

Mature cpo-miR-34b-3p

Accession	MIMAT0046925
Description	Cavia porcellus cpo-miR-34b-3p mature miRNA
Sequence	38 - AAUCACUAACUCCACUGCCAUC - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344