miRBase entry: cpo-mir-212

Stem-loop cpo-mir-212

Accession

MI0038704

Description

Cavia porcellus cpo-mir-212 precursor miRNA

Sequence

ACCUUGGCUCUAGACUGCUUACUgcccgggccgcccucagUAACAGUCUCCAGUCACGGCCA
.((.(((((..((((((.((((((...(((...))).))))))))))))..))))).))...

Structure

--A  U     CU      C      ccc   c 
   CC UGGCU  AGACUG UUACUg   ggg  
   || |||||  |||||| ||||||   ||| c
   GG ACUGA  UCUGAC AAUgac   ccc  
ACC  C     CC      -      --u   g

Annotation confidence Not enough data

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Genome context

DS562887.1: 20418791-20418852 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-212

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-212-5p

Accession	MIMAT0047113
Description	Cavia porcellus cpo-miR-212-5p mature miRNA
Sequence	1 - ACCUUGGCUCUAGACUGCUUACU - 23
Evidence	experimental Illumina [1]

Mature cpo-miR-212-3p

Accession	MIMAT0047114
Description	Cavia porcellus cpo-miR-212-3p mature miRNA
Sequence	41 - UAACAGUCUCCAGUCACGGCCA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344