Stem-loop cpo-mir-328

Accession

MI0038729

Description

Cavia porcellus cpo-mir-328 precursor miRNA

Sequence

GGGGGGGCAGGAGUGGCUCAGGGagaaagcguguaaagcccCUGGCCCUCUCUGCCCUUCUGU
(((((((((((((.(((.(((((.....((.......))))))))))))).))))))))))..

Structure

--          -   U   U     agaaa  gu 
  GGGGGGGCAG GAG GGC CAGGG     gc  g
  |||||||||| ||| ||| |||||     ||  u
  UCUUCCCGUC CUC CCG GUCcc     cg  a
UG          U   -   -     -----  aa 

Annotation confidence Not enough data

Genome context

DS562877.1: 9382914-9382976 [+]

Mature cpo-miR-328-5p

• Accession: MIMAT0047162
• Description: Cavia porcellus cpo-miR-328-5p mature miRNA
• Sequence: 1 - GGGGGGGCAGGAGUGGCUCAGGG - 23
• Evidence: not_experimental

Mature cpo-miR-328-3p

• Accession: MIMAT0047163
• Description: Cavia porcellus cpo-miR-328-3p mature miRNA
• Sequence: 42 - CUGGCCCUCUCUGCCCUUCUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344