miRBase entry: cpo-mir-412

Stem-loop cpo-mir-412

Accession

MI0038768

Description

Cavia porcellus cpo-mir-412 precursor miRNA

Sequence

UGGUCGACCAGUUGGAAAGUAAUugucucuaaugUACUUCACCUGGUCCACUAGCC
((((.((((((.(((..((((((((....)))).))))))).)))))).))))...

Structure

---    C      U   AA    -    u 
   UGGU GACCAG UGG  AGUA AUug c
   |||| |||||| |||  |||| ||||  
   AUCA CUGGUC ACU  UCAU uaau u
CCG    C      C   --    g    c

Annotation confidence Not enough data

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Genome context

DS562966.1: 1117221-1117276 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cpo-mir-412

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-412-5p

Accession	MIMAT0047239
Description	Cavia porcellus cpo-miR-412-5p mature miRNA
Sequence	1 - UGGUCGACCAGUUGGAAAGUAAU - 23
Evidence	experimental Illumina [1]

Mature cpo-miR-412-3p

Accession	MIMAT0047240
Description	Cavia porcellus cpo-miR-412-3p mature miRNA
Sequence	35 - UACUUCACCUGGUCCACUAGCC - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344