miRBase entry: cpo-mir-425

Stem-loop cpo-mir-425

Accession

MI0038771

Description

Cavia porcellus cpo-mir-425 precursor miRNA

Sequence

AAUGACACGAUCACUCCCGUUGAGugggcacccaagaagccAUCGGGAAUGUCGUGUCCGCCC
...(((((((.((.(((((....((((............))))))))).))))))))).....

Structure

--AAU       U  C     UUGA    gcacc 
     GACACGA CA UCCCG    Gugg     c
     ||||||| || |||||    ||||      
     CUGUGCU GU AGGGC    UAcc     a
CCCGC       -  A     ----    gaaga

Annotation confidence Not enough data

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Genome context

DS562863.1: 24185548-24185610 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-425

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-425-5p

Accession	MIMAT0047245
Description	Cavia porcellus cpo-miR-425-5p mature miRNA
Sequence	1 - AAUGACACGAUCACUCCCGUUGAG - 24
Evidence	experimental Illumina [1]

Mature cpo-miR-425-3p

Accession	MIMAT0047246
Description	Cavia porcellus cpo-miR-425-3p mature miRNA
Sequence	42 - AUCGGGAAUGUCGUGUCCGCCC - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344