Stem-loop cpo-mir-505

Accession

MI0038805

Description

Cavia porcellus cpo-mir-505 precursor miRNA

Sequence

GGGAGCCAGGAAGUAUUGAUGUUucugccaguuuagCGUCAACACUUGCUGGUUUCCUC
(((((((((.((((.((((((((...........)))))))).)))).)))))))))..

Structure

--         G    A        ucug 
  GGGAGCCAG AAGU UUGAUGUU    c
  ||||||||| |||| ||||||||    c
  CCUUUGGUC UUCA AACUGCga    a
CU         G    C        uuug 

Annotation confidence Not enough data

Genome context

DS562934.1: 2306789-2306847 [+]

Mature cpo-miR-505-5p

• Accession: MIMAT0047311
• Description: Cavia porcellus cpo-miR-505-5p mature miRNA
• Sequence: 1 - GGGAGCCAGGAAGUAUUGAUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-505-3p

• Accession: MIMAT0047312
• Description: Cavia porcellus cpo-miR-505-3p mature miRNA
• Sequence: 37 - CGUCAACACUUGCUGGUUUCCUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344