Stem-loop cpo-mir-1296

Accession

MI0038857

Description

Cavia porcellus cpo-mir-1296 precursor miRNA

Sequence

UUAGGGCCCUGGCUCCAUCUCCuuuaggaaaaccuucuguggggAGUGGGGCUUUGACCCUAACC
((((((....(((((((.((((((..((((....))))..)))))))))))))....))))))..

Structure

--      CCCU       U      ua    a 
  UUAGGG    GGCUCCA CUCCuu  ggaa a
  ||||||    ||||||| ||||||  ||||  
  AAUCCC    UCGGGGU GAgggg  ucuu c
CC      AGUU       -      ug    c 

Annotation confidence Not enough data

Genome context

DS562870.1: 13768767-13768831 [-]

Mature cpo-miR-1296-5p

• Accession: MIMAT0047415
• Description: Cavia porcellus cpo-miR-1296-5p mature miRNA
• Sequence: 1 - UUAGGGCCCUGGCUCCAUCUCC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1296-3p

• Accession: MIMAT0047416
• Description: Cavia porcellus cpo-miR-1296-3p mature miRNA
• Sequence: 45 - AGUGGGGCUUUGACCCUAACC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344