Stem-loop cpo-mir-1343

Accession

MI0038860

Description

Cavia porcellus cpo-mir-1343 precursor miRNA

Sequence

UGGGGAGCGGCCCCCCGGGCGGgccucugcucuggcccCUCCUGGGGCCCGCACUCUCGU
.((((.((((.((((.(((.(((((........))))).))).)))).)))).))))...

Structure

--U    A    C    C   C     ucu 
   GGGG GCGG CCCC GGG GGgcc   g
   |||| |||| |||| ||| |||||    
   UCUC CGCC GGGG CCU cccgg   c
UGC    A    C    U   C     ucu 

Annotation confidence Not enough data

Genome context

DS562947.1: 3937276-3937335 [-]

Mature cpo-miR-1343-5p

• Accession: MIMAT0047421
• Description: Cavia porcellus cpo-miR-1343-5p mature miRNA
• Sequence: 1 - UGGGGAGCGGCCCCCCGGGCGG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1343-3p

• Accession: MIMAT0047422
• Description: Cavia porcellus cpo-miR-1343-3p mature miRNA
• Sequence: 39 - CUCCUGGGGCCCGCACUCUCGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344