miRBase entry: ocu-mir-194

Stem-loop ocu-mir-194

Accession

MI0039332

Description

Oryctolagus cuniculus ocu-mir-194 precursor miRNA

Sequence

UGUAACAGCAACUCCAUGUGGACuauguaccaauuuCCAGUGGAGAUGCUGUUACUUU
.(((((((((.((((((.((((..((......)).)))))))))).)))))))))...

Structure

--U         A      G    Cu  gu 
   GUAACAGCA CUCCAU UGGA  au  a
   ||||||||| |||||| ||||  ||   
   CAUUGUCGU GAGGUG ACCu  ua  c
UUU         A      -    -u  ac

Annotation confidence Not enough data

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Genome context

CM000805.1: 52957890-52957947 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-194

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-194-5p

Accession	MIMAT0048307
Description	Oryctolagus cuniculus ocu-miR-194-5p mature miRNA
Sequence	1 - UGUAACAGCAACUCCAUGUGGAC - 23
Evidence	experimental Illumina [1]

Mature ocu-miR-194-3p

Accession	MIMAT0048308
Description	Oryctolagus cuniculus ocu-miR-194-3p mature miRNA
Sequence	37 - CCAGUGGAGAUGCUGUUACUUU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344