miRBase entry: ocu-mir-655

Stem-loop ocu-mir-655

Accession

MI0039456

Description

Oryctolagus cuniculus ocu-mir-655 precursor miRNA

Sequence

AGAGGUUAACCGUGUUAUGUUCgcuuguucaucaugaAUAAUACAUGGUUAACCUCUUU
(((((((((((((((..((((((..((.....))))))))..)))))))))))))))..

Structure

--               UA      cu  u 
  AGAGGUUAACCGUGU  UGUUCg  ug u
  |||||||||||||||  ||||||  || c
  UCUCCAAUUGGUACA  AUAagu  ac a
UU               UA      --  u

Annotation confidence Not enough data

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Genome context

GL019048.1: 139340-139398 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from ocu-mir-655

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-655-5p

Accession	MIMAT0048547
Description	Oryctolagus cuniculus ocu-miR-655-5p mature miRNA
Sequence	1 - AGAGGUUAACCGUGUUAUGUUC - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-655-3p

Accession	MIMAT0048548
Description	Oryctolagus cuniculus ocu-miR-655-3p mature miRNA
Sequence	38 - AUAAUACAUGGUUAACCUCUUU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344