Stem-loop gga-mir-132a

Accession

MI0040692

Description

Gallus gallus gga-mir-132a precursor miRNA

Literature search

4 open access papers mention gga-mir-132a
(4 sentences)

Sequence

120084 reads, 1264 reads per million, 5 experiments

ACCGUGGCUUUAGAUUGUUACUgugcugcugggggggUAACAGUCUACAGCCAUGGUCG
(((((((((.((((((((((((.(.((...)).).)))))))))))).)))))))))..

Structure

--         U            g g  g 
  ACCGUGGCU UAGAUUGUUACU u cu  
  ||||||||| |||||||||||| | || c
  UGGUACCGA AUCUGACAAUgg g gg  
GC         C            g g  u 

Annotation confidence High

Genome context

chr19: 5515203-5515261 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-132a

Mature gga-miR-132a-5p

• Accession: MIMAT0049950
• Description: Gallus gallus gga-miR-132a-5p mature miRNA
• Sequence: 1 - ACCGUGGCUUUAGAUUGUUACU - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-132a-3p

• Accession: MIMAT0049951
• Description: Gallus gallus gga-miR-132a-3p mature miRNA
• Sequence: 38 - UAACAGUCUACAGCCAUGGUCG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973