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Pseudorabies virus infected porcine epithelial cell line generates a diverse set of host microRNAs and a special cluster of viral microRNAs |
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|---|---|
| PubMed ID | 22292087 |
| Authors | Wu YQ, Chen DJ, He HB, Chen DS, Chen LL, Chen HC, Liu ZF |
| Journal | PLoS One |
| Volume | 7 |
| Pages | e30988 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| prv-mir-LLT1 | MI0022072 | None | NC_006151.1 | 97878 | 97959 | + | - |
| prv-mir-LLT2 | MI0022073 | None | NC_006151.1 | 98376 | 98455 | + | - |
| prv-mir-LLT3 | MI0022074 | None | NC_006151.1 | 98440 | 98516 | + | - |
| prv-mir-LLT4 | MI0022075 | None | NC_006151.1 | 98752 | 98830 | + | - |
| prv-mir-LLT5 | MI0022076 | None | NC_006151.1 | 99861 | 99940 | + | - |
| prv-mir-LLT6 | MI0022077 | None | NC_006151.1 | 99540 | 99624 | + | - |
| prv-mir-LLT7 | MI0022078 | None | NC_006151.1 | 99279 | 99385 | + | - |
| prv-mir-LLT8 | MI0022079 | None | NC_006151.1 | 100211 | 100297 | + | - |
| prv-mir-LLT9 | MI0022080 | None | NC_006151.1 | 100365 | 100444 | + | - |
| prv-mir-LLT10a | MI0022081 | None | NC_006151.1 | 101789 | 101870 | + | - |
| prv-mir-LLT10b | MI0022082 | None | NC_006151.1 | 142732 | 142813 | - | - |
| prv-mir-LLT11a | MI0022083 | None | NC_006151.1 | 101960 | 102048 | + | - |
| prv-mir-LLT11b | MI0022084 | None | NC_006151.1 | 142554 | 142642 | - | - |
| ssc-mir-140 | MI0002437 | 401 | chrUScaf726 | 107288 | 107357 | + | High |
| ssc-let-7f-1 | MI0002446 | 1108 | chrX | 51801728 | 51801810 | - | - |
| ssc-mir-21 | MI0002459 | 6294 | chr12 | 37340385 | 37340476 | + | High |
| ssc-mir-9-1 | MI0002462 | 119 | chr4 | 102543210 | 102543298 | - | - |
| ssc-mir-9-2 | MI0002463 | 119 | chr2 | 98744572 | 98744658 | - | - |
| ssc-mir-17 | MI0008214 | 201 | chr11 | 66610060 | 66610136 | + | - |
| ssc-mir-185 | MI0008218 | 125 | chr14 | 55086524 | 55086599 | + | - |
| ssc-mir-101-1 | MI0010678 | 2388 | chr1 | 242988419 | 242988509 | - | - |
| ssc-mir-101-2 | MI0010679 | 2342 | chr6 | 135736115 | 135736195 | + | - |
| ssc-mir-1 | MI0010682 | 194 | chr17 | 69285393 | 69285500 | - | - |
| ssc-let-7a-1 | MI0013085 | 1026 | chr9 | 54378059 | 54378138 | - | - |
| ssc-mir-320 | MI0013097 | 251 | chr14 | 6954934 | 6955013 | - | - |
| ssc-mir-423 | MI0013099 | 474 | chr12 | 48287019 | 48287098 | - | High |
| ssc-mir-10a | MI0013101 | 71 | chr12 | 24791267 | 24791346 | - | - |
| ssc-mir-10b | MI0013102 | 1208 | chr15 | 91419021 | 91419100 | + | - |
| ssc-mir-100 | MI0013128 | 992 | chr9 | 54383382 | 54383461 | - | - |
| ssc-mir-4339 | MI0015935 | None | None | None | - | ||
| ssc-let-7a-2 | MI0017984 | 699 | chr3 | 44864433 | 44864524 | + | - |
| ssc-let-7f-2 | MI0022121 | 1058 | chr3 | 44864800 | 44864896 | + | - |
| ssc-mir-9-3 | MI0022123 | 127 | chr7 | 59924193 | 59924273 | + | - |