miRBase entry: 20360741

The genome of a songbird

PubMed ID 20360741
Authors "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
Journal "Nature
Volume 464
Pages 757-762

There are 220 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
tgu-mir-1329 MI0013635 None chr3 99620780 99620866 + -
tgu-mir-2955 MI0013636 None chr1A 57982665 57982780 - -
tgu-mir-1451 MI0013637 None chr3 78313627 78313727 + -
tgu-mir-1677 MI0013638 None chr3 76231058 76231133 + -
tgu-mir-1805 MI0013639 None chr1 32735542 32735629 + -
tgu-mir-2956-1 MI0013640 None chr4A 17209002 17209082 - -
tgu-mir-2956-2 MI0013641 None chr4A 17209002 17209082 + -
tgu-mir-148b MI0013642 None chr2 52006667 52006740 + -
tgu-mir-2958 MI0013643 None chr21 2262481 2262581 - -
tgu-mir-1784 MI0013644 None chr3 31872434 31872525 - -
tgu-mir-2959 MI0013645 None chr21_random 691001 691090 + -
tgu-mir-1662 MI0013646 None chr2 2943947 2944012 - -
tgu-mir-2960 MI0013647 None chr3 39458890 39458983 - -
tgu-mir-2961 MI0013648 None chrUn 173940744 173940917 - -
tgu-mir-2962 MI0013649 None chr17 6428017 6428101 + -
tgu-mir-2963 MI0013650 None chr22_random 503984 504165 + -
tgu-mir-219b MI0013651 None chr17 5454921 5455078 - -
tgu-mir-146a MI0013652 None chr4 69209753 69209868 - -
tgu-mir-458 MI0013653 None chr13 1397261 1397340 - -
tgu-mir-1729 MI0013654 None chr15 8049890 8049991 - -
tgu-mir-2965 MI0013655 None chr7 10597644 10597708 - -
tgu-mir-456 MI0013656 None chr3 36454435 36454513 + -
tgu-mir-425 MI0013657 None chr12 12254268 12254356 + -
tgu-mir-1803 MI0013658 None chr2 97931879 97931967 + -
tgu-mir-2966 MI0013659 None chr8 3476812 3476890 + -
tgu-mir-2954 MI0013660 None chrZ 31606464 31606535 + -
tgu-mir-2967 MI0013661 None chr3 30569564 30569627 - -
tgu-mir-460b MI0013662 None chr4A 20408530 20408636 + -
tgu-mir-2968 MI0013663 None chr4 46377079 46377184 - -
tgu-mir-2969 MI0013664 None chr12 3102837 3102938 - -
tgu-mir-2970 MI0013665 None chr12 12254481 12254632 + -
tgu-mir-2188 MI0013666 None chr22 3239208 3239376 - -
tgu-mir-2971 MI0013667 None chr12 2419453 2419553 - -
tgu-mir-2972 MI0013668 None chr2 61107767 61107870 - -
tgu-mir-2973 MI0013669 None chrZ 43522129 43522205 - -
tgu-mir-2974 MI0013670 None chr5 60051711 60051841 - -
tgu-mir-2975 MI0013671 None chr26_random 475597 475677 - -
tgu-mir-2976-1 MI0013672 None chr28 2245990 2246120 - -
tgu-mir-2976-3 MI0013673 None chr4A 19890709 19890854 + -
tgu-mir-2976-2 MI0013674 None chr1 113831865 113831974 + -
tgu-mir-2977 MI0013675 None chr1 48213234 48213320 - -
tgu-mir-2978 MI0013676 None chr18 7548428 7548489 - -
tgu-mir-2979-1 MI0013677 None chr1 47711423 47711509 - -
tgu-mir-2980-1 MI0013678 None chr2 61822032 61822111 - -
tgu-mir-2981 MI0013679 None chr2 66507055 66507147 - -
tgu-mir-2982 MI0013680 None chr23_random 143904 144011 - -
tgu-mir-2983 MI0013681 None chr5 14115790 14115863 + -
tgu-mir-2984 MI0013682 None chr1 39743243 39743336 - -
tgu-mir-2985-1 MI0013683 None chr4 29313507 29313589 + -
tgu-mir-2985-2 MI0013684 None chr1 75574420 75574500 - -
tgu-mir-2986 MI0013685 None chrUn 20186550 20186689 + -
tgu-mir-2987 MI0013686 None chr12 776733 776812 + -
tgu-mir-2988 MI0013687 None chr2 2951825 2951932 - -
tgu-mir-129 MI0013688 None chr5 19791223 19791305 + -
tgu-mir-139 MI0013689 None chr1 113641295 113641379 - -
tgu-mir-363 MI0013690 None chr4A 7274550 7274638 + -
tgu-mir-9-2 MI0013691 None chrZ 12103943 12104015 - -
tgu-mir-9-1 MI0013692 None chr10 12969737 12969809 - -
tgu-mir-148a MI0013693 None chr2 52006663 52006774 - -
tgu-let-7i MI0013694 None chr1A 32383283 32383374 + -
tgu-mir-125-1 MI0013695 None chr1 109696652 109696723 + -
tgu-mir-125-2 MI0013696 None chr24 3113096 3113167 - -
tgu-mir-30b MI0013697 None chr3 84719838 84719910 + -
tgu-mir-124-1 MI0013698 None chr2 120492455 120492565 + -
tgu-mir-124-2 MI0013699 None chr3 111968090 111968160 + -
tgu-mir-124-3 MI0013700 None chr20 9826516 9826646 - -
tgu-mir-101-1 MI0013701 None chrZ 64083558 64083629 - -
tgu-mir-101-2 MI0013702 None chr8 26300517 26300588 - -
tgu-let-7b MI0013703 None chr1A 61564105 61564196 - -
tgu-mir-7-1 MI0013704 None chrZ 52731915 52731987 + -
tgu-mir-7-2 MI0013705 None chr10 13221462 13221534 - -
tgu-mir-7-3 MI0013706 None chr10 13225597 13225669 - -
tgu-mir-7-4 MI0013707 None chr28 3838836 3838928 - -
tgu-mir-100-1 MI0013708 None chr24 3146829 3146939 - -
tgu-mir-100-2 MI0013709 None chr24 3149999 3150109 - -
tgu-mir-221 MI0013710 None chr1 5261236 5261308 + -
tgu-mir-128-2 MI0013711 None chr2 28894377 28894486 - -
tgu-mir-128-1 MI0013712 None chr7 33186771 33186841 + -
tgu-mir-222-1 MI0013713 None chr1 5260725 5260798 + -
tgu-mir-222-2 MI0013714 None chrUn 1817289 1817362 + -
tgu-mir-138-1 MI0013715 None chr2 61107967 61108039 - -
tgu-mir-138-2 MI0013716 None chr11 5991080 5991172 - -
tgu-mir-26-1 MI0013717 None chr2 4696535 4696606 + -
tgu-mir-26-2 MI0013718 None chrUn 100873856 100873927 + -
tgu-mir-19b-1 MI0013719 None chr1 43202482 43202554 - -
tgu-mir-19b-2 MI0013720 None chr4A 7274224 7274296 + -
tgu-let-7e MI0013721 None chr26 532984 533075 - -
tgu-let-7a-1 MI0013722 None chr1A 61564945 61565036 - -
tgu-let-7a-3 MI0013723 None chr12 772013 772103 + -
tgu-let-7a-2 MI0013724 None chr24 3137431 3137522 - -
tgu-let-7a-4 MI0013725 None chr26 532798 532889 - -
tgu-let-7c-1 MI0013726 None chr1 109662682 109662773 + -
tgu-let-7c-2 MI0013727 None chrUn 52862184 52862275 + -
tgu-mir-30c MI0013728 None chr3 84746568 84746639 + -
tgu-mir-218-1 MI0013729 None chr4 54394615 54394725 - -
tgu-mir-218-2 MI0013730 None chr13 14950530 14950660 - -
tgu-mir-103-1 MI0013731 None chr13 14805606 14805718 - -
tgu-mir-103-2 MI0013732 None chr4 68894825 68894897 - -
tgu-mir-103-3 MI0013733 None chrUn 37745864 37745976 + -
tgu-mir-99-1 MI0013734 None chr1 109661967 109662037 + -
tgu-mir-99-2 MI0013735 None chrUn 52861469 52861539 + -
tgu-mir-2989-1 MI0013736 None chr8 3326534 3326623 - -
tgu-mir-2989-2 MI0013737 None chr8 3329105 3329194 - -
tgu-mir-1559 MI0013738 None chr7 27262570 27262701 - -
tgu-mir-21 MI0013739 None chr19 8993795 8993866 + -
tgu-let-7g-1 MI0013740 None chr12 6512028 6512119 - -
tgu-let-7g-2 MI0013741 None chrUn 123478082 123478173 - -
tgu-mir-122 MI0013742 None chrZ_random 328161 328232 + -
tgu-let-7f MI0013743 None chr12 772417 772508 + -
tgu-mir-383 MI0013744 None chr4 42215192 42215263 + -
tgu-mir-29a-1 MI0013745 None chr1A 2716218 2716288 + -
tgu-mir-29a-2 MI0013746 None chr26 3761359 3761429 + -
tgu-mir-451 MI0013747 None chr19 7265342 7265414 - -
tgu-mir-27 MI0013748 None chrZ 9900324 9900414 - -
tgu-mir-30a MI0013749 None chr23_random 192848 192939 + -
tgu-let-7d MI0013750 None chr12 773412 773503 + -
tgu-mir-34b MI0013751 None chr24 1752148 1752220 - -
tgu-mir-33 MI0013752 None chr1A 48937654 48937723 - -
tgu-mir-24 MI0013753 None chrZ 9899801 9899932 - -
tgu-mir-551 MI0013755 None chr9 23617065 23617135 - -
tgu-mir-338 MI0013756 None chr14 14972005 14972076 - -
tgu-mir-137 MI0013757 None chr8 8780107 8780179 + -
tgu-mir-126 MI0013758 None chr17 8833549 8833680 - -
tgu-mir-200a MI0013759 None chr21 5894308 5894400 + -
tgu-mir-181a-1 MI0013760 None chr8 5108663 5108735 - -
tgu-mir-181a-2 MI0013761 None chr17 10712187 10712259 + -
tgu-mir-2991 MI0013762 None chr2 149540758 149540826 - -
tgu-mir-490-1 MI0013763 None chrUn 87366743 87366835 + -
tgu-mir-490-2 MI0013764 None chr1A 58337862 58337954 + -
tgu-mir-2992 MI0013765 None chrZ 57612703 57612773 + -
tgu-mir-2993 MI0013766 None chr24 6698127 6698194 + -
tgu-mir-2994 MI0013767 None chr20 4496092 4496163 - -
tgu-mir-153-1 MI0013768 None chr2 9797628 9797699 - -
tgu-mir-153-2 MI0013769 None chr7 10584139 10584210 - -
tgu-mir-20a MI0013770 None chr1 43202624 43202696 - -
tgu-mir-142 MI0013771 None chr19 468507 468577 - -
tgu-mir-15a MI0013772 None chr1 55909891 55909961 + -
tgu-mir-107 MI0013773 None chr6 18493361 18493433 - -
tgu-mir-140 MI0013774 None chr11 11805159 11805230 + -
tgu-mir-194-1 MI0013775 None chr3 9653586 9653657 + -
tgu-mir-194-2 MI0013776 None chrUn 94526975 94527046 + -
tgu-mir-135a-1 MI0013777 None chr1A 45650428 45650500 + -
tgu-mir-135b MI0013778 None chr12 6536042 6536114 - -
tgu-mir-184 MI0013779 None chr10 20485747 20485858 + -
tgu-mir-1-2 MI0013780 None chr2 108164864 108164935 - -
tgu-mir-1-1 MI0013781 None chr20 10493672 10493743 - -
tgu-mir-181b-1 MI0013782 None chr8 5108479 5108552 - -
tgu-mir-181b-2 MI0013783 None chr17 10713241 10713314 + -
tgu-mir-17a MI0013784 None chr1 43203076 43203147 - -
tgu-mir-202-1 MI0013785 None chr6 20496802 20496871 + -
tgu-mir-202-2 MI0013786 None chrUn 49162039 49162108 - -
tgu-mir-23 MI0013787 None chrZ 9900645 9900715 - -
tgu-mir-187 MI0013788 None chr2_random 838730 838799 + -
tgu-mir-219a MI0013789 None chr17 5454954 5455025 + -
tgu-mir-2995 MI0013790 None chr5 12886083 12886153 + -
tgu-mir-204-1 MI0013791 None chrZ 16883812 16883883 + -
tgu-mir-204-2 MI0013792 None chr10 5338529 5338600 + -
tgu-mir-204-3 MI0013793 None chr28 1366327 1366418 - -
tgu-mir-204-4 MI0013794 None chr28 1367959 1368050 - -
tgu-mir-133-1 MI0013795 None chr2 108161719 108161789 - -
tgu-mir-133-2 MI0013796 None chr3 110618925 110618995 + -
tgu-mir-133-3 MI0013797 None chr20 10480781 10480851 - -
tgu-mir-375 MI0013798 None chr7 10362273 10362344 - -
tgu-mir-130a MI0013799 None chr15 8478910 8478981 + -
tgu-mir-92-1 MI0013800 None chr1 43202366 43202437 - -
tgu-mir-92-2 MI0013801 None chr4A 7274404 7274495 + -
tgu-mir-199-1 MI0013802 None chr17 5549805 5549875 + -
tgu-mir-216a MI0013803 None chr3 28149612 28149683 + -
tgu-mir-215 MI0013804 None chr3 9653905 9653975 + -
tgu-mir-130b MI0013805 None chr15 8487921 8488052 + -
tgu-mir-217 MI0013806 None chr3 28151737 28151809 + -
tgu-mir-454 MI0013807 None chr15 8486784 8486856 + -
tgu-mir-130c MI0013808 None chr19 8784984 8785095 - -
tgu-mir-365-1 MI0013809 None chr14 6788932 6789003 - -
tgu-mir-365-2 MI0013810 None chr18 11031436 11031547 + -
tgu-mir-16a MI0013811 None chr1 55910032 55910123 + -
tgu-mir-32 MI0013812 None chr2 89259080 89259150 - -
tgu-mir-193a MI0013813 None chr14 6793220 6793291 - -
tgu-mir-16c MI0013814 None chr4A 7178185 7178256 + -
tgu-mir-18a MI0013815 None chr1 43202937 43203008 - -
tgu-mir-16b MI0013816 None chr9 25555835 25555906 - -
tgu-mir-190 MI0013817 None chr10 3908501 3908572 - -
tgu-mir-106 MI0013818 None chr4A 7273746 7273818 + -
tgu-mir-20b MI0013819 None chr4A 7274092 7274164 + -
tgu-mir-200b MI0013820 None chr21 5892896 5892968 + -
tgu-mir-216b MI0013821 None chr3 28144514 28144584 + -
tgu-mir-1388 MI0013822 None chr20 8822103 8822194 - -
tgu-mir-301 MI0013823 None chr19 8783990 8784062 - -
tgu-mir-144 MI0013824 None chr19 7265533 7265602 - -
tgu-mir-15b MI0013825 None chr9 25555991 25556061 - -
tgu-mir-34a MI0013826 None chr21 5249928 5249999 + -
tgu-mir-223 MI0013827 None chr4A 6644931 6645001 - -
tgu-mir-2996-1 MI0013828 None chrZ 4571576 4571647 - -
tgu-mir-2996-2 MI0013829 None chrZ 4600983 4601054 - -
tgu-mir-29b-1 MI0013830 None chr1A 2715204 2715274 + -
tgu-mir-29b-2 MI0013831 None chr26 3760396 3760466 + -
tgu-mir-146b MI0013832 None chr6 22623576 22623647 + -
tgu-mir-214 MI0013833 None chr8_random 1635714 1635805 + -
tgu-mir-2997 MI0013834 None chr20 6709318 6709385 + -
tgu-mir-203 MI0013835 None chr5 52214055 52214186 + -
tgu-mir-147 MI0013836 None chr10 10438197 10438266 + -
tgu-mir-18b MI0013837 None chr4A 7273805 7273936 + -
tgu-mir-193b MI0013838 None chr18 11017822 11017890 + -
tgu-mir-146c MI0013839 None chr13 11635088 11635159 + -
tgu-mir-455 MI0013840 None chr17 5173177 5173247 + -
tgu-mir-19a MI0013841 None chr1 43202791 43202860 - -
tgu-mir-155 MI0013842 None chr1 112588974 112589044 + -
tgu-mir-30d MI0013843 None chr2 149540698 149540769 - -
tgu-mir-460a MI0013844 None chr2 1092239 1092320 - -
tgu-mir-31 MI0013845 None chrZ 32186011 32186119 + -
tgu-mir-205 MI0013846 None chr1A 622279 622359 - -
tgu-mir-199-2 MI0013847 None chr8_random 1629749 1629876 + -
tgu-mir-135a-2 MI0013848 None chr26_random 713415 713500 - -
tgu-mir-489 MI0013849 None chr2 25436279 25436376 - -
tgu-mir-15c MI0013850 None chr4A 7177772 7177853 + -
tgu-mir-2979-2 MI0013852 None chrUn 140548829 140548915 + -
tgu-mir-2980-2 MI0013853 None chrUn 19256347 19256426 + -
tgu-mir-204-5 MI0015938 None None None -
tgu-mir-34c-1 MI0015939 None chr24 1752711 1752787 - -
tgu-mir-34c-2 MI0015969 None chrUn 76202851 76202927 - -



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