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Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis |
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|---|---|
| PubMed ID | 20230504 |
| Authors | "Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J" |
| Journal | "Plant J |
| Volume | 62 |
| Pages | 960-976 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| vvi-MIR3623 | MI0016015 | 2097 | chr18 | 24650012 | 24650140 | + | High |
| vvi-MIR2950 | MI0016016 | 41 | chr7 | 14340407 | 14340513 | + | High |
| vvi-MIR3624 | MI0016017 | 552 | chr8 | 2139190 | 2139391 | + | - |
| vvi-MIR3625 | MI0016018 | 26 | chr17 | 2378186 | 2378340 | - | - |
| vvi-MIR3626 | MI0016019 | 9 | None | None | - | ||
| vvi-MIR3627 | MI0016020 | 0 | chr14 | 28302547 | 28302693 | - | - |
| vvi-MIR3628 | MI0016021 | 0 | chr13 | 16716055 | 16716204 | - | - |
| vvi-MIR3629a | MI0016022 | 14 | chr13 | 18253988 | 18254169 | + | - |
| vvi-MIR3629b | MI0016023 | 12 | chr14 | 3031525 | 3031629 | + | - |
| vvi-MIR3629c | MI0016024 | 12 | chr17 | 822213 | 822334 | + | - |
| vvi-MIR477b | MI0016025 | 4 | chr2 | 1237689 | 1237805 | + | - |
| vvi-MIR3630 | MI0016026 | 10 | chr17 | 6897444 | 6897545 | + | - |
| vvi-MIR3631a | MI0016027 | 19 | None | None | Low | ||
| vvi-MIR3631b | MI0016028 | 19 | chr5 | 6430141 | 6430304 | + | Low |
| vvi-MIR3631c | MI0016029 | 2 | None | None | - | ||
| vvi-MIR3631d | MI0016030 | 2 | None | None | - | ||
| vvi-MIR3632 | MI0016031 | 31 | chr14 | 23394870 | 23395028 | + | High |
| vvi-MIR3633a | MI0016032 | 1160 | chr17 | 5521907 | 5522061 | + | High |
| vvi-MIR3634 | MI0016033 | 105 | chr17 | 5681205 | 5681313 | - | - |
| vvi-MIR3633b | MI0016034 | 54 | chr17 | 5521567 | 5521678 | + | High |
| vvi-MIR3635 | MI0016035 | 142 | chr18 | 27357633 | 27357764 | + | Low |
| vvi-MIR3636 | MI0016036 | 2536 | chr16 | 5414826 | 5414966 | - | High |
| vvi-MIR3637 | MI0016037 | 67 | chr16 | 20659651 | 20659852 | - | - |
| vvi-MIR3638 | MI0016038 | 5 | chr17 | 7119929 | 7120133 | - | - |
| vvi-MIR3639 | MI0016039 | 8 | chr9 | 21823006 | 21823219 | + | - |
| vvi-MIR3640 | MI0016040 | 322 | chr16 | 11986826 | 11987025 | + | High |