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Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant |
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|---|---|
| PubMed ID | 24376253 |
| Authors | Kravchik M, Sunkar R, Damodharan S, Stav R, Zohar M, Isaacson T, Arazi T |
| Journal | J Exp Bot |
| Volume | 65 |
| Pages | 725-739 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| sly-MIR1919c | MI0008356 | None | chr8 | 56567231 | 56567374 | + | - |
| sly-MIR482e | MI0018478 | None | chr4 | 56023736 | 56023923 | + | - |
| sly-MIR6027 | MI0020258 | None | None | None | - | ||
| sly-MIR319b | MI0029098 | None | chr6 | 1551676 | 1551967 | + | - |
| sly-MIR319c | MI0029099 | None | chr3 | 56451852 | 56452046 | + | - |
| sly-MIR403 | MI0029100 | None | chr1 | 78368928 | 78369069 | + | - |
| sly-MIR9469 | MI0029101 | None | chr7 | 58623979 | 58624121 | - | - |
| sly-MIR394 | MI0029102 | None | chr4 | 65891077 | 65891276 | + | - |
| sly-MIR9470 | MI0029103 | None | chr8 | 393508 | 393994 | + | - |
| sly-MIR9471b | MI0029104 | None | chr12 | 1979337 | 1979576 | - | - |
| sly-MIR166c | MI0029105 | None | chr1 | 92621085 | 92621272 | - | - |
| sly-MIR5302b | MI0029106 | None | chr7 | 4228975 | 4229187 | + | - |
| sly-MIR9471a | MI0029107 | None | chr12 | 1977726 | 1977906 | - | - |
| sly-MIR9472 | MI0029108 | None | chr8 | 58966598 | 58966830 | + | - |
| sly-MIR156d | MI0029109 | None | chr8 | 51913686 | 51913852 | - | - |
| sly-MIR156e | MI0029110 | None | chr8 | 51945235 | 51945339 | - | - |
| sly-MIR396a | MI0029111 | None | chr12 | 2905644 | 2905807 | - | - |
| sly-MIR167b | MI0029112 | None | chr2 | 38817780 | 38818076 | - | - |
| sly-MIR482d | MI0029113 | None | chr6 | 37380095 | 37380240 | - | - |
| sly-MIR9473 | MI0029114 | None | chr7 | 3076297 | 3076415 | + | - |
| sly-MIR9474 | MI0029115 | None | chr8 | 62139543 | 62139921 | - | - |
| sly-MIR9475 | MI0029116 | None | chr9 | 61391955 | 61392310 | - | - |
| sly-MIR390a | MI0029117 | None | chr10 | 59349779 | 59349941 | - | - |
| sly-MIR9476 | MI0029118 | None | chr1 | 88110498 | 88110606 | - | - |
| sly-MIR9477 | MI0029119 | None | chr6 | 43739860 | 43740092 | + | - |
| sly-MIR9478 | MI0029120 | None | chr11 | 52996644 | 52996848 | + | - |
| sly-MIR169e | MI0029121 | None | chr8 | 57585442 | 57585633 | + | - |
| sly-MIR9479 | MI0029122 | None | chr5 | 65132400 | 65132649 | + | - |
| sly-MIR390b | MI0029123 | None | chr9 | 8388184 | 8388292 | + | - |
| sly-MIR396b | MI0029124 | None | chr7 | 2628748 | 2628897 | - | - |
| sly-MIR171e | MI0029125 | None | chr7 | 60765650 | 60765756 | + | - |
| sly-MIR477 | MI0029126 | None | chr10 | 3641768 | 3641882 | - | - |
| sly-MIR1919a | MI0008354 | None | chr8 | 56612335 | 56612457 | + | - |
| sly-MIR160a | MI0008357 | None | chr5 | 65436314 | 65436442 | - | - |
| sly-MIR166a | MI0008358 | None | chr6 | 2516284 | 2516394 | - | - |
| sly-MIR166b | MI0008359 | None | chr8 | 65694593 | 65694793 | + | - |
| sly-MIR395a | MI0008369 | None | chr5 | 1703152 | 1703350 | + | - |
| sly-MIR162 | MI0009975 | None | None | None | - | ||
| sly-MIR5302a | MI0018479 | None | None | None | - | ||
| sly-MIR482a | MI0018482 | None | chr3 | 64766256 | 64766347 | + | - |
| sly-MIR6024 | MI0020242 | None | chr1 | 83238914 | 83239030 | - | - |
| sly-MIR482b | MI0020250 | None | chr6 | 37380417 | 37380541 | - | - |
| sly-MIR482c | MI0020251 | None | chr6 | 37388175 | 37388285 | - | - |
| sly-MIR6026 | MI0020257 | None | chr1 | 832340 | 832581 | + | - |
| sly-MIR168a | MI0024352 | None | chr8 | 558753 | 558911 | + | - |