1 The Hippo pathway acts via p53 and microRNAs to control proliferation and proapoptotic gene expression during tissue growth
Zhang W, Cohen SM
Biol Open (2013) 2:822-828
score: 75

Other hairpins from this paper: dme-bantam, dme-mir-11, dme-mir-13a, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-6-1, dme-mir-6-2, dme-mir-6-3,

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2 SmD1 Modulates the miRNA Pathway Independently of Its Pre-mRNA Splicing Function
Xiong XP, Vogler G, Kurthkoti K, Samsonova A, Zhou R
PLoS Genet (2015) 11:e1005475
score: 24

Other hairpins from this paper: dme-bantam, dme-let-7, dme-mir-11, dme-mir-184, dme-mir-276a, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-317, dme-mir-33, dme-mir-34,

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3 microRNA target predictions across seven Drosophila species and comparison to mammalian targets
Grün D, Wang YL, Langenberger D, Gunsalus KC, Rajewsky N
PLoS Comput Biol (2005) 1:e13
score: 23

Other hairpins from this paper: dme-bantam, dme-let-7, dme-mir-10, dme-mir-11, dme-mir-124, dme-mir-125, dme-mir-133, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-184, dme-mir-210, dme-mir-277, dme-mir-279, dme-mir-285, dme-mir-286, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-304, dme-mir-310, dme-mir-4, dme-mir-6-1, dme-mir-6-2, dme-mir-6-3, dme-mir-7, dme-mir-79,

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4 Identification and characteristics of microRNAs from Bombyx mori
He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y
BMC Genomics (2008) 9:248
score: 22

Other hairpins from this paper: bmo-bantam, bmo-let-7, bmo-mir-100, bmo-mir-133, bmo-mir-13a, bmo-mir-13b, bmo-mir-14, bmo-mir-184, bmo-mir-1a, bmo-mir-1b, bmo-mir-263a, bmo-mir-263b, bmo-mir-275, bmo-mir-277, bmo-mir-279a, bmo-mir-279b, bmo-mir-279c, bmo-mir-279d, bmo-mir-279e, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-305, bmo-mir-31, bmo-mir-7, bmo-mir-71, bmo-mir-8, bmo-mir-9a, bmo-mir-9b, bmo-mir-9c, bmo-mir-9d, dme-bantam, dme-let-7, dme-mir-1, dme-mir-100, dme-mir-133, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-14, dme-mir-184, dme-mir-263a, dme-mir-263b, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-279, dme-mir-289, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-31a, dme-mir-31b, dme-mir-7, dme-mir-8, dme-mir-9a, dme-mir-9b, dme-mir-9c,

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5 Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
Genome Biol Evol (2016) 8:2133-2144
score: 16

Other hairpins from this paper: dme-let-7, dme-mir-10, dme-mir-100, dme-mir-124, dme-mir-125, dme-mir-133, dme-mir-137, dme-mir-14, dme-mir-193, dme-mir-219, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-279, dme-mir-281-1, dme-mir-281-2, dme-mir-282, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-31a, dme-mir-31b, dme-mir-33, dme-mir-8, dme-mir-92a, dme-mir-965, dme-mir-981, pte-iab-4-1, pte-iab-4-2, pte-let-7, pte-mir-10, pte-mir-100a, pte-mir-100b, pte-mir-11942a, pte-mir-11942b, pte-mir-11942c, pte-mir-11942d, pte-mir-11951a, pte-mir-11951b, pte-mir-11960, pte-mir-11961a, pte-mir-11961b, pte-mir-11961c, pte-mir-125a, pte-mir-125b, pte-mir-14, pte-mir-193a, pte-mir-193b, pte-mir-275, pte-mir-276-1, pte-mir-276-2, pte-mir-278b, pte-mir-279, pte-mir-281, pte-mir-2a, pte-mir-2b-1, pte-mir-2b-2, pte-mir-2c, pte-mir-2d, pte-mir-2e, pte-mir-2f, pte-mir-2g-1, pte-mir-2g-2, pte-mir-305, pte-mir-3477, pte-mir-3931, pte-mir-71-1, pte-mir-71-2, pte-mir-8, pte-mir-92a, pte-mir-96, pte-mir-981, pte-mir-993a, pte-mir-993b-1, pte-mir-993b-2,

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6 Revealing posttranscriptional regulatory elements through network-level conservation
Chan CS, Elemento O, Tavazoie S
PLoS Comput Biol (2005) 1:e69
score: 15

Other hairpins from this paper: cbr-let-7, cbr-mir-1, cbr-mir-124a, cbr-mir-124b, cbr-mir-124c, cbr-mir-2, cbr-mir-233, cbr-mir-248, cbr-mir-356, cbr-mir-43, cbr-mir-75, cbr-mir-79, cbr-mir-80, cbr-mir-81, cbr-mir-82, cbr-mir-86, cbr-mir-87, cel-let-7, cel-mir-1, cel-mir-124, cel-mir-2, cel-mir-233, cel-mir-248, cel-mir-273, cel-mir-356a, cel-mir-356b, cel-mir-43, cel-mir-75, cel-mir-79, cel-mir-80, cel-mir-81, cel-mir-82, cel-mir-86, cel-mir-87, dme-bantam, dme-let-7, dme-mir-1, dme-mir-124, dme-mir-184, dme-mir-277, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-4, dme-mir-79, dme-mir-87, dps-bantam, dps-let-7, dps-mir-1, dps-mir-124, dps-mir-184, dps-mir-277, dps-mir-2a-1, dps-mir-2a-2, dps-mir-2b-1, dps-mir-2b-2, dps-mir-2c, dps-mir-4, dps-mir-79, dps-mir-87,

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7 HDAC inhibitor misprocesses bantam oncomiRNA, but stimulates hid induced apoptotic pathway
Bhadra U, Mondal T, Bag I, Mukhopadhyay D, Das P, Parida BB, Mainkar PS, Reddy CR, Bhadra MP
Sci Rep (2015) 5:14747
score: 10

Other hairpins from this paper: dme-bantam, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-14, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c,

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8 Xrn1/Pacman affects apoptosis and regulates expression of hid and reaper
Waldron JA, Jones CI, Towler BP, Pashler AL, Grima DP, Hebbes S, Crossman SH, Zabolotskaya MV, Newbury SF
Biol Open (2015) 4:649-660
score: 9

Other hairpins from this paper: dme-bantam, dme-mir-277, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-9a,

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9 Clusters of microRNAs emerge by new hairpins in existing transcripts
Marco A, Ninova M, Ronshaugen M, Griffiths-Jones S
Nucleic Acids Res (2013) 41:7745-7752
score: 7

Other hairpins from this paper: dme-let-7, dme-mir-1, dme-mir-100, dme-mir-125, dme-mir-133, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-193, dme-mir-219, dme-mir-263a, dme-mir-276a, dme-mir-276b, dme-mir-279, dme-mir-285, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-309, dme-mir-6-3, dme-mir-7, dme-mir-87, dme-mir-92a, dme-mir-92b, dme-mir-9a, dme-mir-9b, dme-mir-9c,

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10 Carrier of Wingless (Cow), a secreted heparan sulfate proteoglycan, promotes extracellular transport of Wingless
Chang YH, Sun YH
PLoS One (2014) 9:e111573
score: 6

Other hairpins from this paper: dme-mir-1, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c,

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11 Sex-biased expression of microRNAs in Drosophila melanogaster
Marco A
Open Biol (2014) 4:140024
score: 5

Other hairpins from this paper: dme-mir-13b-2, dme-mir-184, dme-mir-276a, dme-mir-276b, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-310, dme-mir-311, dme-mir-312, dme-mir-313, dme-mir-314, dme-mir-92a, dme-mir-92b, dme-mir-983-1, dme-mir-983-2, dme-mir-985, dme-mir-989, dme-mir-993, dme-mir-994, dme-mir-995, dme-mir-997, dme-mir-9a, dme-mir-9b, dme-mir-9c,

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12 Selection Against Maternal microRNA Target Sites in Maternal Transcripts
Marco A
G3 (Bethesda) (2015) 5:2199-2207
score: 5

Other hairpins from this paper: dme-bantam, dme-let-7, dme-mir-10, dme-mir-1010, dme-mir-1012, dme-mir-11, dme-mir-13b-2, dme-mir-14, dme-mir-184, dme-mir-263a, dme-mir-276a, dme-mir-277, dme-mir-279, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2b-2, dme-mir-305, dme-mir-306, dme-mir-310, dme-mir-311, dme-mir-312, dme-mir-313, dme-mir-318, dme-mir-31a, dme-mir-33, dme-mir-34, dme-mir-3644, dme-mir-4941, dme-mir-4944, dme-mir-4963, dme-mir-4967, dme-mir-4972, dme-mir-4979, dme-mir-4982, dme-mir-4985, dme-mir-4986, dme-mir-8, dme-mir-92a, dme-mir-92b, dme-mir-956, dme-mir-970, dme-mir-995, dme-mir-999, dme-mir-9a, dme-mir-9b, dme-mir-9c,

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13 Drosophila microRNAs 263a/b confer robustness during development by protecting nascent sense organs from apoptosis
Hilgers V, Bushati N, Cohen SM
PLoS Biol (2010) 8:e1000396
score: 5

Other hairpins from this paper: dme-bantam, dme-mir-14, dme-mir-184, dme-mir-263a, dme-mir-263b, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-7, dme-mir-8,

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14 The microRNA toolkit of insects
Ylla G, Fromm B, Piulachs MD, Belles X
Sci Rep (2016) 6:37736
score: 5

Other hairpins from this paper: ame-mir-10, ame-mir-1006, ame-mir-1175, ame-mir-12, ame-mir-133, ame-mir-137, ame-mir-13a, ame-mir-13b, ame-mir-193, ame-mir-2-1, ame-mir-2-2, ame-mir-2-3, ame-mir-210, ame-mir-276, ame-mir-29b, ame-mir-2b, ame-mir-3049, ame-mir-306, ame-mir-316, ame-mir-317, ame-mir-31a, ame-mir-375, ame-mir-3770, ame-mir-6012, ame-mir-6037, ame-mir-71, ame-mir-750, ame-mir-932, ame-mir-971, ame-mir-989, ame-mir-9a, ame-mir-9b, ame-mir-9c, api-mir-10, api-mir-137, api-mir-13a, api-mir-210, api-mir-276, api-mir-29, api-mir-2a, api-mir-2b, api-mir-2c, api-mir-3049, api-mir-306, api-mir-316, api-mir-317, api-mir-71, api-mir-971, api-mir-9a, api-mir-9b, bmo-mir-10, bmo-mir-1175, bmo-mir-12, bmo-mir-133, bmo-mir-137, bmo-mir-13a, bmo-mir-13b, bmo-mir-210, bmo-mir-276, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-306a, bmo-mir-306b, bmo-mir-31, bmo-mir-316, bmo-mir-317, bmo-mir-375, bmo-mir-71, bmo-mir-750, bmo-mir-932, bmo-mir-970, bmo-mir-989a, bmo-mir-989b, bmo-mir-9a, bmo-mir-9b, bmo-mir-9c, bmo-mir-9d, dme-mir-10, dme-mir-1006, dme-mir-1007, dme-mir-12, dme-mir-133, dme-mir-137, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-193, dme-mir-210, dme-mir-276a, dme-mir-276b, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-306, dme-mir-309, dme-mir-316, dme-mir-317, dme-mir-31a, dme-mir-31b, dme-mir-375, dme-mir-932, dme-mir-970, dme-mir-971, dme-mir-989, dme-mir-9a, dme-mir-9b, dme-mir-9c, lmi-mir-10, lmi-mir-210, lmi-mir-276, lmi-mir-9a, tca-mir-10, tca-mir-1175, tca-mir-12, tca-mir-133, tca-mir-137, tca-mir-13a, tca-mir-13b, tca-mir-193, tca-mir-2-1, tca-mir-2-2, tca-mir-2-3, tca-mir-210, tca-mir-276, tca-mir-29, tca-mir-3049, tca-mir-309a, tca-mir-309b, tca-mir-309c, tca-mir-31, tca-mir-316, tca-mir-317, tca-mir-375, tca-mir-6012, tca-mir-71, tca-mir-750, tca-mir-932, tca-mir-970, tca-mir-971b, tca-mir-989, tca-mir-9a, tca-mir-9b, tca-mir-9c, tca-mir-9d, tca-mir-9e,

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15 A meta-analysis revealed insights into the sources, conservation and impact of microRNA 5'-isoforms in four model species
Xia J, Zhang W
Nucleic Acids Res (2014) 42:1427-1441
score: 4

Other hairpins from this paper: dme-let-7, dme-mir-1, dme-mir-10, dme-mir-124, dme-mir-133, dme-mir-137, dme-mir-193, dme-mir-210, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-307a, dme-mir-34, dme-mir-79, dme-mir-87, dme-mir-994, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, hsa-mir-1-1, hsa-mir-1-2, hsa-mir-101-1, hsa-mir-101-2, hsa-mir-10a, hsa-mir-10b, hsa-mir-124-1, hsa-mir-124-2, hsa-mir-124-3, hsa-mir-126, hsa-mir-133a-1, hsa-mir-133a-2, hsa-mir-133b, hsa-mir-137, hsa-mir-140, hsa-mir-142, hsa-mir-143, hsa-mir-155, hsa-mir-183, hsa-mir-193a, hsa-mir-193b, hsa-mir-199b, hsa-mir-203a, hsa-mir-203b, hsa-mir-210, hsa-mir-222, hsa-mir-223, hsa-mir-27a, hsa-mir-29a, hsa-mir-34a, hsa-mir-34b, hsa-mir-34c, hsa-mir-378a, hsa-mir-411, hsa-mir-944, mmu-let-7a-1, mmu-let-7a-2, mmu-let-7b, mmu-let-7c-1, mmu-let-7c-2, mmu-let-7d, mmu-let-7e, mmu-let-7f-1, mmu-let-7f-2, mmu-let-7g, mmu-let-7i, mmu-let-7j, mmu-let-7k, mmu-mir-101a, mmu-mir-101b, mmu-mir-101c, mmu-mir-10a, mmu-mir-10b, mmu-mir-124-1, mmu-mir-124-2, mmu-mir-124-3, mmu-mir-124b, mmu-mir-126a, mmu-mir-126b, mmu-mir-133a-1, mmu-mir-133a-2, mmu-mir-133b, mmu-mir-133c, mmu-mir-137, mmu-mir-140, mmu-mir-142a, mmu-mir-142b, mmu-mir-143, mmu-mir-155, mmu-mir-183, mmu-mir-193a, mmu-mir-193b, mmu-mir-199b, mmu-mir-1a-1, mmu-mir-1a-2, mmu-mir-1b, mmu-mir-203, mmu-mir-210, mmu-mir-222, mmu-mir-223, mmu-mir-27a, mmu-mir-295, mmu-mir-29a, mmu-mir-34a, mmu-mir-34b, mmu-mir-34c, mmu-mir-378a, mmu-mir-411,

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16 A transgenic resource for conditional competitive inhibition of conserved Drosophila microRNAs
Fulga TA, McNeill EM, Binari R, Yelick J, Blanche A, Booker M, Steinkraus BR, Schnall-Levin M, Zhao Y, DeLuca T, Bejarano F, Han Z, Lai EC, Wall DP, Perrimon N, Van Vactor D
Nat Commun (2015) 6:7279
score: 4

Other hairpins from this paper: dme-bantam, dme-mir-1, dme-mir-1001, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-14, dme-mir-190, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-307a, dme-mir-307b, dme-mir-310, dme-mir-31a, dme-mir-31b, dme-mir-34, dme-mir-7, dme-mir-79, dme-mir-8, dme-mir-92a, dme-mir-92b, dme-mir-957, dme-mir-975, dme-mir-986, dme-mir-987, dme-mir-9a, dme-mir-9b, dme-mir-9c,

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17 Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988
score: 4

Other hairpins from this paper: bmo-bantam, bmo-let-7, bmo-mir-100, bmo-mir-13a, bmo-mir-13b, bmo-mir-184, bmo-mir-2756, bmo-mir-2766, bmo-mir-279a, bmo-mir-279b, bmo-mir-279c, bmo-mir-279d, bmo-mir-279e, bmo-mir-281, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-305, bmo-mir-307, bmo-mir-317, bmo-mir-34, bmo-mir-7, bmo-mir-71, bmo-mir-92a, bmo-mir-92b, bmo-mir-932, bmo-mir-9a, dme-bantam, dme-let-7, dme-mir-100, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-184, dme-mir-279, dme-mir-281-1, dme-mir-281-2, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-307a, dme-mir-307b, dme-mir-317, dme-mir-34, dme-mir-7, dme-mir-92a, dme-mir-92b, dme-mir-932, dme-mir-9a, sfr-mir-10463, sfr-mir-10471, sfr-mir-10494, sfr-mir-13a, sfr-mir-13b, sfr-mir-2756, sfr-mir-2766, sfr-mir-279a, sfr-mir-279b, sfr-mir-279c, sfr-mir-281, sfr-mir-2a, sfr-mir-2b, sfr-mir-2c, sfr-mir-307, sfr-mir-317, sfr-mir-34, sfr-mir-7, sfr-mir-92a, sfr-mir-932,

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18 Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
Mead EA, Tu Z
BMC Genomics (2008) 9:244
score: 3

Other hairpins from this paper: aae-let-7, aae-mir-12, aae-mir-14, aae-mir-210, aae-mir-277, aae-mir-281, aae-mir-283, aae-mir-2a, aae-mir-2b, aae-mir-2c, aae-mir-306, aae-mir-34, aae-mir-375, aae-mir-79, aae-mir-8, aae-mir-981, aae-mir-989, aae-mir-996, aae-mir-9a-1, aae-mir-9a-2, aae-mir-9b, aga-let-7, aga-mir-12, aga-mir-14, aga-mir-2-1, aga-mir-2-2, aga-mir-210, aga-mir-277, aga-mir-281, aga-mir-283, aga-mir-2b, aga-mir-2c, aga-mir-306, aga-mir-34, aga-mir-375, aga-mir-79, aga-mir-8, aga-mir-981, aga-mir-989, aga-mir-996, aga-mir-9a, aga-mir-9b, dme-let-7, dme-mir-12, dme-mir-14, dme-mir-210, dme-mir-277, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-304, dme-mir-306, dme-mir-34, dme-mir-375, dme-mir-79, dme-mir-8, dme-mir-981, dme-mir-989, dme-mir-996, dme-mir-9a, dme-mir-9b,

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19 Re-Arrangements in the Cytoplasmic Distribution of Small RNAs Following the Maternal-to-Zygotic Transition in Drosophila Embryos
Cosacak MI, Yiğit H, Kizil C, Akgül B
Genes (Basel) (2018) 9
score: 3

Other hairpins from this paper: dme-bantam, dme-mir-1, dme-mir-1012, dme-mir-184, dme-mir-263a, dme-mir-263b, dme-mir-2b-1, dme-mir-2b-2, dme-mir-309, dme-mir-310, dme-mir-34, dme-mir-5, dme-mir-8, dme-mir-92a, dme-mir-986, dme-mir-9a, dme-mir-9c,

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20 The cricket paralysis virus suppressor inhibits microRNA silencing mediated by the Drosophila Argonaute-2 protein
Besnard-Guérin C, Jacquier C, Pidoux J, Deddouche S, Antoniewski C
PLoS One (2015) 10:e0120205
score: 3

Other hairpins from this paper: dme-bantam, dme-mir-2b-1, dme-mir-2b-2, dme-mir-5, dme-mir-6-1, dme-mir-6-2, dme-mir-6-3, dme-mir-7,

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21 A new strategy for identification of highly conserved microRNAs in non-model insect, Spodoptera litura
Gao L, Zuo H, Liu K, Li H, Zhong G
Int J Mol Sci (2012) 13:612-627
score: 3

Other hairpins from this paper: bmo-bantam, bmo-mir-13a, bmo-mir-13b, bmo-mir-14, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, dme-bantam, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-14, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2,

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22 Characterization of host microRNAs that respond to DNA virus infection in a crustacean
Huang T, Xu D, Zhang X
BMC Genomics (2012) 13:159
score: 3

Other hairpins from this paper: dme-let-7, dme-mir-1, dme-mir-100, dme-mir-124, dme-mir-125, dme-mir-133, dme-mir-184, dme-mir-193, dme-mir-279, dme-mir-281-2, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-33, dme-mir-34, dme-mir-7, dme-mir-79, dme-mir-92a, dme-mir-92b, dme-mir-9a, dme-mir-9b, dme-mir-9c, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, hsa-mir-1-1, hsa-mir-1-2, hsa-mir-100, hsa-mir-10a, hsa-mir-124-1, hsa-mir-124-2, hsa-mir-124-3, hsa-mir-125a, hsa-mir-125b-1, hsa-mir-125b-2, hsa-mir-133a-1, hsa-mir-133a-2, hsa-mir-133b, hsa-mir-184, hsa-mir-193a, hsa-mir-193b, hsa-mir-33a, hsa-mir-33b, hsa-mir-34a, hsa-mir-34b, hsa-mir-34c, hsa-mir-7-1, hsa-mir-7-2, hsa-mir-7-3, hsa-mir-9-1, hsa-mir-9-2, hsa-mir-9-3, hsa-mir-92a-1, hsa-mir-92a-2, hsa-mir-92b,

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23 Computational and transcriptional evidence for microRNAs in the honey bee genome
Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
Genome Biol (2007) 8:R97
score: 2

Other hairpins from this paper: ame-let-7, ame-mir-1-1, ame-mir-1-2, ame-mir-100, ame-mir-12, ame-mir-133, ame-mir-137, ame-mir-13a, ame-mir-13b, ame-mir-190, ame-mir-2-1, ame-mir-2-2, ame-mir-2-3, ame-mir-275, ame-mir-276, ame-mir-277, ame-mir-279a, ame-mir-279b, ame-mir-279c, ame-mir-279d, ame-mir-283, ame-mir-2b, ame-mir-305, ame-mir-317, ame-mir-34, ame-mir-375, ame-mir-7, ame-mir-71, ame-mir-79, ame-mir-927a, ame-mir-927b, ame-mir-92a, ame-mir-92b-1, ame-mir-92b-2, ame-mir-92c, ame-mir-932, ame-mir-9a, ame-mir-9b, dme-let-7, dme-mir-1, dme-mir-100, dme-mir-12, dme-mir-133, dme-mir-137, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-190, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-279, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-317, dme-mir-34, dme-mir-375, dme-mir-7, dme-mir-79, dme-mir-927, dme-mir-92a, dme-mir-92b, dme-mir-932, dme-mir-9a, dme-mir-9b,

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24 Comparative analysis of miRNA expression during the development of insects of different metamorphosis modes and germ-band types
Ylla G, Piulachs MD, Belles X
BMC Genomics (2017) 18:774
score: 2

Other hairpins from this paper: dme-bantam, dme-let-7, dme-mir-1, dme-mir-10, dme-mir-252, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-278, dme-mir-279, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-3, dme-mir-305, dme-mir-309, dme-mir-31a, dme-mir-31b, dme-mir-34, dme-mir-5, dme-mir-8, dme-mir-92a, dme-mir-92b, dme-mir-9a, dme-mir-9b, dme-mir-9c, dvi-bantam, dvi-let-7, dvi-mir-1, dvi-mir-10, dvi-mir-252, dvi-mir-276a, dvi-mir-276b, dvi-mir-277, dvi-mir-278, dvi-mir-279, dvi-mir-2a-1, dvi-mir-2a-2, dvi-mir-2b, dvi-mir-2c, dvi-mir-3, dvi-mir-305, dvi-mir-309, dvi-mir-31a, dvi-mir-31b, dvi-mir-34, dvi-mir-5, dvi-mir-8, dvi-mir-92a, dvi-mir-92b, dvi-mir-9a, dvi-mir-9b, dvi-mir-9c, tca-bantam, tca-let-7, tca-mir-1, tca-mir-10, tca-mir-2-1, tca-mir-2-2, tca-mir-2-3, tca-mir-252a, tca-mir-252b, tca-mir-276, tca-mir-277, tca-mir-279a, tca-mir-279b, tca-mir-279c, tca-mir-279d, tca-mir-279e, tca-mir-29, tca-mir-305, tca-mir-309a, tca-mir-309b, tca-mir-309c, tca-mir-31, tca-mir-34, tca-mir-71, tca-mir-8, tca-mir-92a, tca-mir-92b, tca-mir-92c, tca-mir-9a, tca-mir-9b, tca-mir-9c, tca-mir-9d, tca-mir-9e,

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25 The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima
Chipman AD, Ferrier DE, Brena C, Qu J, Hughes DS, Schröder R, Torres-Oliva M, Znassi N, Jiang H, Almeida FC, Alonso CR, Apostolou Z, Aqrawi P, Arthur W, Barna JC, Blankenburg KP, Brites D, Capella-Gutiérrez S, Coyle M, Dearden PK, Du Pasquier L, Duncan
PLoS Biol (2014) 12:e1002005
score: 2

Other hairpins from this paper: dme-let-7, dme-mir-100, dme-mir-125, dme-mir-282, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-965, smr-mir-282, smr-mir-3930, smr-mir-965,

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26 A Systematic Genetic Screen to Dissect the MicroRNA Pathway in Drosophila
Pressman S, Reinke CA, Wang X, Carthew RW
G3 (Bethesda) (2012) 2:437-448
score: 1

Other hairpins from this paper: dme-bantam, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-4, dme-mir-7, dme-mir-79,

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27 A complex small RNA repertoire is generated by a plant/fungal-like machinery and effected by a metazoan-like Argonaute in the single-cell human parasite Toxoplasma gondii
Braun L, Cannella D, Ortet P, Barakat M, Sautel CF, Kieffer S, Garin J, Bastien O, Voinnet O, Hakimi MA
PLoS Pathog (2010) 6:e1000920
score: 1

Other hairpins from this paper: dme-let-7, dme-mir-1, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-3, dme-mir-4, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, hsa-mir-1-1, hsa-mir-1-2, hsa-mir-15a, hsa-mir-15b, hsa-mir-24-1, hsa-mir-24-2,

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28 Comparative profiling of microRNAs in the winged and wingless English grain aphid, Sitobion avenae (F.) (Homoptera: Aphididae)
Li X, Zhang F, Coates B, Zhang Y, Zhou X, Cheng D
Sci Rep (2016) 6:35668
score: 1

Other hairpins from this paper: api-let-7, api-mir-1, api-mir-10, api-mir-100, api-mir-276, api-mir-277, api-mir-2a, api-mir-2b, api-mir-2c, api-mir-315, api-mir-7, api-mir-8, api-mir-87a, api-mir-87b, api-mir-9a, dme-let-7, dme-mir-1, dme-mir-10, dme-mir-100, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-315, dme-mir-7, dme-mir-8, dme-mir-87, dme-mir-9a,

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29 SRSF1-dependent nuclear export inhibition of C9ORF72 repeat transcripts prevents neurodegeneration and associated motor deficits
Hautbergue GM, Castelli LM, Ferraiuolo L, Sanchez-Martinez A, Cooper-Knock J, Higginbottom A, Lin YH, Bauer CS, Dodd JE, Myszczynska MA, Alam SM, Garneret P, Chandran JS, Karyka E, Stopford MJ, Smith EF, Kirby J, Meyer K, Kaspar BK, Isaacs AM, El-Khamisy
Nat Commun (2017) 8:16063
score: 1

Other hairpins from this paper: dme-mir-1, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c,

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