1 Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells
Rengaraj D, Lee BR, Lee SI, Seo HW, Han JY
PLoS One (2011) 6:e19524
score: 98

Other hairpins from this paper: gga-mir-15c, gga-mir-222a, gga-mir-222b, gga-mir-29b-1, gga-mir-29b-2, gga-mir-383,

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2 MicroRNA expression profiling during the life cycle of the silkworm (Bombyx mori)
Liu S, Zhang L, Li Q, Zhao P, Duan J, Cheng D, Xiang Z, Xia Q
BMC Genomics (2009) 10:455
score: 82

Other hairpins from this paper: bmo-bantam, bmo-let-7, bmo-mir-100, bmo-mir-124, bmo-mir-133, bmo-mir-184, bmo-mir-1a, bmo-mir-1b, bmo-mir-252, bmo-mir-263a, bmo-mir-263b, bmo-mir-274, bmo-mir-275, bmo-mir-276, bmo-mir-277, bmo-mir-279a, bmo-mir-279b, bmo-mir-279c, bmo-mir-279d, bmo-mir-279e, bmo-mir-281, bmo-mir-283, bmo-mir-285, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-305, bmo-mir-307, bmo-mir-317, bmo-mir-34, bmo-mir-79, bmo-mir-8, bmo-mir-87, bmo-mir-92a, bmo-mir-92b, bmo-mir-970, gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-let-7b, gga-let-7c, gga-let-7d, gga-let-7f, gga-let-7g, gga-let-7i, gga-let-7j, gga-let-7k, gga-let-7l-1, gga-let-7l-2, gga-mir-100, gga-mir-10b, gga-mir-124a, gga-mir-124a-2, gga-mir-124b, gga-mir-124c, gga-mir-125b-1, gga-mir-125b-2, gga-mir-133a-1, gga-mir-133a-2, gga-mir-133b, gga-mir-133c, gga-mir-184, gga-mir-1a-1, gga-mir-1a-2, gga-mir-1b, gga-mir-1c, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c, gga-mir-34a, gga-mir-34b, gga-mir-34c, gga-mir-92-1, gga-mir-92-2,

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3 Growth hormone-regulated mRNAs and miRNAs in chicken hepatocytes
Wang X, Yang L, Wang H, Shao F, Yu J, Jiang H, Han Y, Gong D, Gu Z
PLoS One (2014) 9:e112896
score: 10

Other hairpins from this paper: gga-mir-122-1, gga-mir-122-2, gga-mir-122b, gga-mir-122b-1, gga-mir-122b-2, gga-mir-126, gga-mir-148a, gga-mir-15b, gga-mir-193a, gga-mir-219b, gga-mir-223, gga-mir-29b-1, gga-mir-29b-2, gga-mir-33-1, gga-mir-33-2, gga-mir-3525, gga-mir-451,

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4 Role of virus-encoded microRNAs in Avian viral diseases
Yao Y, Nair V
Viruses (2014) 6:1379-1394
score: 8

Other hairpins from this paper: gga-mir-155, gga-mir-221, gga-mir-222a, gga-mir-222b, gga-mir-223, gga-mir-26a, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c, gga-mir-451,

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5 Up-regulation of microRNA let-7c by quercetin inhibits pancreatic cancer progression by activation of Numbl
Nwaeburu CC, Bauer N, Zhao Z, Abukiwan A, Gladkich J, Benner A, Herr I
Oncotarget (2016) 7:58367-58380
score: 8

Other hairpins from this paper: gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-let-7b, gga-let-7c, gga-let-7d, gga-let-7f, gga-let-7g, gga-let-7i, gga-let-7j, gga-let-7k, gga-let-7l-1, gga-let-7l-2, gga-mir-103-1, gga-mir-103-2, gga-mir-106, gga-mir-125b-1, gga-mir-125b-2, gga-mir-194, gga-mir-200a, gga-mir-200b, gga-mir-215, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c, gga-mir-34a, gga-mir-34b, gga-mir-34c, gga-mir-96,

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6 Expression and localization of matrix metalloproteinases (MMP-2, -7, -9) and their tissue inhibitors (TIMP-2, -3) in the chicken oviduct during maturation
Leśniak-Walentyn A, Hrabia A
Cell Tissue Res (2016) 364:185-197
score: 7

Other hairpins from this paper: gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c,

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7 EpimiR: a database of curated mutual regulation between miRNAs and epigenetic modifications
Dai E, Yu X, Zhang Y, Meng F, Wang S, Liu X, Liu D, Wang J, Li X, Jiang W
Database (Oxford) (2014) 2014:bau023
score: 7

Other hairpins from this paper: gga-mir-19a, gga-mir-200a, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-31, hsa-mir-19a, hsa-mir-200a, hsa-mir-29a, hsa-mir-29b-1, hsa-mir-29b-2, hsa-mir-31, mmu-mir-19a, mmu-mir-200a, mmu-mir-29a, mmu-mir-29b-1, mmu-mir-29b-2, mmu-mir-31, rno-mir-19a, rno-mir-200a, rno-mir-29a, rno-mir-29b-1, rno-mir-29b-2, rno-mir-29b-3, rno-mir-31a, rno-mir-31b,

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8 Systematic analysis of the regulatory functions of microRNAs in chicken hepatic lipid metabolism
Li H, Ma Z, Jia L, Li Y, Xu C, Wang T, Han R, Jiang R, Li Z, Sun G, Kang X, Liu X
Sci Rep (2016) 6:31766
score: 7

Other hairpins from this paper: gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-let-7b, gga-let-7c, gga-let-7d, gga-let-7f, gga-let-7g, gga-let-7i, gga-let-7j, gga-let-7k, gga-let-7l-1, gga-let-7l-2, gga-mir-101-1, gga-mir-101-2, gga-mir-10a, gga-mir-122-1, gga-mir-122-2, gga-mir-122b, gga-mir-122b-1, gga-mir-122b-2, gga-mir-126, gga-mir-128-1, gga-mir-128-2, gga-mir-130a, gga-mir-130b, gga-mir-130c, gga-mir-1456, gga-mir-146a, gga-mir-146b, gga-mir-146c, gga-mir-147, gga-mir-148a, gga-mir-15a, gga-mir-15b, gga-mir-15c, gga-mir-16-1, gga-mir-16-2, gga-mir-1662, gga-mir-16c, gga-mir-1786, gga-mir-181a-1, gga-mir-181a-2, gga-mir-181b-1, gga-mir-181b-2, gga-mir-20a, gga-mir-20b, gga-mir-21, gga-mir-214, gga-mir-218-1, gga-mir-218-2, gga-mir-22, gga-mir-221, gga-mir-23b, gga-mir-24, gga-mir-26a, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c, gga-mir-30a, gga-mir-30b, gga-mir-30c-1, gga-mir-30c-2, gga-mir-30d, gga-mir-30e, gga-mir-365-1, gga-mir-365-2, gga-mir-365b, gga-mir-375, gga-mir-7b,

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9 Gene-Diet Interactions in Type 2 Diabetes: The Chicken and Egg Debate
Ortega Á, Berná G, Rojas A, Martín F, Soria B
Int J Mol Sci (2017) 18
score: 6

Other hairpins from this paper: gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-let-7b, gga-let-7c, gga-let-7d, gga-let-7f, gga-let-7g, gga-let-7i, gga-let-7j, gga-let-7k, gga-let-7l-1, gga-let-7l-2, gga-mir-143, gga-mir-200a, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c, gga-mir-375, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, hsa-mir-143, hsa-mir-200a, hsa-mir-29a, hsa-mir-29b-1, hsa-mir-29b-2, hsa-mir-29c, hsa-mir-375,

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10 Expression profiling of preadipocyte microRNAs by deep sequencing on chicken lines divergently selected for abdominal fatness
Wang W, Du ZQ, Cheng B, Wang Y, Yao J, Li Y, Cao Z, Luan P, Wang N, Li H
PLoS One (2015) 10:e0117843
score: 6

Other hairpins from this paper: gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-let-7b, gga-let-7c, gga-let-7d, gga-let-7f, gga-let-7g, gga-let-7i, gga-let-7j, gga-let-7k, gga-let-7l-1, gga-let-7l-2, gga-mir-100, gga-mir-101-1, gga-mir-101-2, gga-mir-103-1, gga-mir-103-2, gga-mir-10a, gga-mir-1306, gga-mir-130a, gga-mir-1416, gga-mir-142, gga-mir-143, gga-mir-1434, gga-mir-146a, gga-mir-146c, gga-mir-148a, gga-mir-1551, gga-mir-1563, gga-mir-15a, gga-mir-1653, gga-mir-1684a, gga-mir-1684b, gga-mir-17, gga-mir-1805, gga-mir-181b-1, gga-mir-181b-2, gga-mir-19a, gga-mir-1a-1, gga-mir-1a-2, gga-mir-1b, gga-mir-200a, gga-mir-200b, gga-mir-206, gga-mir-21, gga-mir-218-1, gga-mir-218-2, gga-mir-2188, gga-mir-22, gga-mir-221, gga-mir-222a, gga-mir-222b, gga-mir-27b, gga-mir-29b-1, gga-mir-29b-2, gga-mir-31, gga-mir-32, gga-mir-33-1, gga-mir-33-2, gga-mir-3535, gga-mir-429, gga-mir-451, gga-mir-454, gga-mir-458a, gga-mir-458b, gga-mir-460a, gga-mir-9-1, gga-mir-9-2, gga-mir-9-3, gga-mir-9-4, gga-mir-92-1, gga-mir-92-2, gga-mir-9b-1, gga-mir-9b-2,

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11 Gga-miR-130b-3p inhibits MSB1 cell proliferation, migration, invasion, and its downregulation in MD tumor is attributed to hypermethylation
Zhao C, Li X, Han B, Qu L, Liu C, Song J, Lian L, Yang N
Oncotarget (2018) 9:24187-24198
score: 4

Other hairpins from this paper: gga-mir-124a, gga-mir-130b, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c,

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12 Development of bioluminescent chick chorioallantoic membrane (CAM) models for primary pancreatic cancer cells: a platform for drug testing
Rovithi M, Avan A, Funel N, Leon LG, Gomez VE, Wurdinger T, Griffioen AW, Verheul HM, Giovannetti E
Sci Rep (2017) 7:44686
score: 3

Other hairpins from this paper: gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-mir-143, gga-mir-145, gga-mir-155, gga-mir-15a, gga-mir-17, gga-mir-182, gga-mir-191, gga-mir-200a, gga-mir-200b, gga-mir-21, gga-mir-222a, gga-mir-222b, gga-mir-29b-1, gga-mir-29b-2, gga-mir-34a,

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13 Nuclear Factor kappa B is central to Marek's disease herpesvirus induced neoplastic transformation of CD30 expressing lymphocytes in-vivo
Kumar S, Kunec D, Buza JJ, Chiang HI, Zhou H, Subramaniam S, Pendarvis K, Cheng HH, Burgess SC
BMC Syst Biol (2012) 6:123
score: 1

Other hairpins from this paper: gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-mir-10b, gga-mir-124b, gga-mir-130a, gga-mir-130b, gga-mir-140, gga-mir-183, gga-mir-1a-1, gga-mir-1a-2, gga-mir-1b, gga-mir-204-1, gga-mir-204-2, gga-mir-215, gga-mir-221, gga-mir-222a, gga-mir-222b, gga-mir-223, gga-mir-26a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-31, gga-mir-489, gga-mir-7-1, gga-mir-7-2, gga-mir-7-3, gga-mir-7b, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-mir-10b, hsa-mir-130a, hsa-mir-130b, hsa-mir-140, hsa-mir-183, hsa-mir-204, hsa-mir-215, hsa-mir-221, hsa-mir-222, hsa-mir-223, hsa-mir-26a-1, hsa-mir-26a-2, hsa-mir-29b-1, hsa-mir-29b-2, hsa-mir-31, hsa-mir-489, hsa-mir-7-1, hsa-mir-7-2, hsa-mir-7-3,

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14 Splenic microRNA Expression Profiles and Integration Analyses Involved in Host Responses to <i>Salmonella enteritidis</i> Infection in Chickens
Li P, Fan W, Li Q, Wang J, Liu R, Everaert N, Liu J, Zhang Y, Zheng M, Cui H, Zhao G, Wen J
Front Cell Infect Microbiol (2017) 7:377
score: 1

Other hairpins from this paper: gga-let-7a-1, gga-let-7a-2, gga-let-7a-3, gga-let-7b, gga-let-7c, gga-let-7d, gga-let-7f, gga-let-7g, gga-let-7i, gga-let-7j, gga-let-7k, gga-let-7l-1, gga-let-7l-2, gga-mir-101-1, gga-mir-101-2, gga-mir-103-1, gga-mir-103-2, gga-mir-125b-1, gga-mir-125b-2, gga-mir-126, gga-mir-1306, gga-mir-130b, gga-mir-137, gga-mir-1416, gga-mir-143, gga-mir-146a, gga-mir-146b, gga-mir-146c, gga-mir-155, gga-mir-1677, gga-mir-221, gga-mir-26a, gga-mir-26a-2, gga-mir-27b, gga-mir-29a, gga-mir-29b-1, gga-mir-29b-2, gga-mir-29c, gga-mir-30a, gga-mir-30b, gga-mir-30c-1, gga-mir-30c-2, gga-mir-30d, gga-mir-30e, gga-mir-34a, gga-mir-429, gga-mir-455, gga-mir-7460, gga-mir-9-1, gga-mir-9-2, gga-mir-9-3, gga-mir-9-4, gga-mir-92-1, gga-mir-92-2, gga-mir-9b-1, gga-mir-9b-2,

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