1 Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia
Dekanty A, Romero NM, Bertolin AP, Thomas MG, Leishman CC, Perez-Perri JI, Boccaccio GL, Wappner P
PLoS Genet (2010) 6:e1000994
score: 24

Other hairpins from this paper: dme-mir-12,

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2 miR-190 Enhances HIF-Dependent Responses to Hypoxia in Drosophila by Inhibiting the Prolyl-4-hydroxylase Fatiga
De Lella Ezcurra AL, Bertolin AP, Kim K, Katz MJ, Gándara L, Misra T, Luschnig S, Perrimon N, Melani M, Wappner P
PLoS Genet (2016) 12:e1006073
score: 16

Other hairpins from this paper: dme-mir-12, dme-mir-184, dme-mir-190, dme-mir-210, dme-mir-274, dme-mir-280, dme-mir-970, dme-mir-985,

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3 Identification of novel Drosophila melanogaster microRNAs
Sandmann T, Cohen SM
PLoS One (2007) 2:e1265
score: 13

Other hairpins from this paper: dme-let-7, dme-mir-12, dme-mir-279, dme-mir-285, dme-mir-286, dme-mir-310, dme-mir-311, dme-mir-312, dme-mir-313, dme-mir-318,

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4 Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
Mead EA, Tu Z
BMC Genomics (2008) 9:244
score: 7

Other hairpins from this paper: aae-let-7, aae-mir-12, aae-mir-14, aae-mir-210, aae-mir-277, aae-mir-281, aae-mir-283, aae-mir-2a, aae-mir-2b, aae-mir-2c, aae-mir-306, aae-mir-34, aae-mir-375, aae-mir-79, aae-mir-8, aae-mir-981, aae-mir-989, aae-mir-996, aae-mir-9a-1, aae-mir-9a-2, aae-mir-9b, aga-let-7, aga-mir-12, aga-mir-14, aga-mir-2-1, aga-mir-2-2, aga-mir-210, aga-mir-277, aga-mir-281, aga-mir-283, aga-mir-2b, aga-mir-2c, aga-mir-306, aga-mir-34, aga-mir-375, aga-mir-79, aga-mir-8, aga-mir-981, aga-mir-989, aga-mir-996, aga-mir-9a, aga-mir-9b, dme-let-7, dme-mir-12, dme-mir-14, dme-mir-210, dme-mir-277, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-304, dme-mir-306, dme-mir-34, dme-mir-375, dme-mir-79, dme-mir-8, dme-mir-981, dme-mir-989, dme-mir-996, dme-mir-9a, dme-mir-9b,

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5 Convergent evolution of argonaute-2 slicer antagonism in two distinct insect RNA viruses
van Mierlo JT, Bronkhorst AW, Overheul GJ, Sadanandan SA, Ekström JO, Heestermans M, Hultmark D, Antoniewski C, van Rij RP
PLoS Pathog (2012) 8:e1002872
score: 6

Other hairpins from this paper: dme-mir-1, dme-mir-12,

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6 The miRNA pathway controls rapid changes in activity-dependent synaptic structure at the Drosophila melanogaster neuromuscular junction
Nesler KR, Sand RI, Symmes BA, Pradhan SJ, Boin NG, Laun AE, Barbee SA
PLoS One (2013) 8:e68385
score: 6

Other hairpins from this paper: dme-let-7, dme-mir-1, dme-mir-12, dme-mir-124, dme-mir-283, dme-mir-284, dme-mir-285, dme-mir-289, dme-mir-304, dme-mir-310, dme-mir-314, dme-mir-8, dme-mir-958, dme-mir-9a,

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7 Evidence for post-transcriptional regulation of clustered microRNAs in Drosophila
Ryazansky SS, Gvozdev VA, Berezikov E
BMC Genomics (2011) 12:371
score: 4

Other hairpins from this paper: dme-let-7, dme-mir-100, dme-mir-12, dme-mir-125, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-275, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2c, dme-mir-304, dme-mir-305, dme-mir-306, dme-mir-310, dme-mir-34, dme-mir-6-1, dme-mir-960, dme-mir-983-1, dme-mir-983-2, dme-mir-991, dme-mir-992,

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8 Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila
Gu J, Fu H, Zhang X, Li Y
BMC Bioinformatics (2007) 8:432
score: 3

Other hairpins from this paper: dme-let-7, dme-mir-10, dme-mir-12, dme-mir-133, dme-mir-219, dme-mir-263a, dme-mir-274, dme-mir-281-2, dme-mir-282, dme-mir-283, dme-mir-285, dme-mir-286, dme-mir-2a-2, dme-mir-2c, dme-mir-305, dme-mir-309, dme-mir-310, dme-mir-311, dme-mir-316, dme-mir-31a, dme-mir-31b, dme-mir-34, dme-mir-5, dme-mir-7, dme-mir-79, dme-mir-8, dme-mir-9a, dme-mir-9c,

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9 Sequence relationships among C. elegans, D. melanogaster and human microRNAs highlight the extensive conservation of microRNAs in biology
Ibáñez-Ventoso C, Vora M, Driscoll M
PLoS One (2008) 3:e2818
score: 2

Other hairpins from this paper: dme-let-7, dme-mir-10, dme-mir-100, dme-mir-1007, dme-mir-1009, dme-mir-1010, dme-mir-12, dme-mir-124, dme-mir-125, dme-mir-252, dme-mir-263a, dme-mir-263b, dme-mir-3, dme-mir-306, dme-mir-318, dme-mir-8, dme-mir-87, dme-mir-954, dme-mir-966, dme-mir-993, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, hsa-mir-100, hsa-mir-10a, hsa-mir-10b, hsa-mir-124-1, hsa-mir-124-2, hsa-mir-124-3, hsa-mir-125a, hsa-mir-125b-1, hsa-mir-125b-2, hsa-mir-129-1, hsa-mir-129-2, hsa-mir-141, hsa-mir-183, hsa-mir-200a, hsa-mir-208a, hsa-mir-25, hsa-mir-29b-1, hsa-mir-29b-2, hsa-mir-301a, hsa-mir-301b, hsa-mir-377, hsa-mir-873, hsa-mir-99a,

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10 Computational and transcriptional evidence for microRNAs in the honey bee genome
Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
Genome Biol (2007) 8:R97
score: 1

Other hairpins from this paper: ame-let-7, ame-mir-1-1, ame-mir-1-2, ame-mir-100, ame-mir-12, ame-mir-133, ame-mir-137, ame-mir-13a, ame-mir-13b, ame-mir-190, ame-mir-2-1, ame-mir-2-2, ame-mir-2-3, ame-mir-275, ame-mir-276, ame-mir-277, ame-mir-279a, ame-mir-279b, ame-mir-279c, ame-mir-279d, ame-mir-283, ame-mir-2b, ame-mir-305, ame-mir-317, ame-mir-34, ame-mir-375, ame-mir-7, ame-mir-71, ame-mir-79, ame-mir-927a, ame-mir-927b, ame-mir-92a, ame-mir-92b-1, ame-mir-92b-2, ame-mir-92c, ame-mir-932, ame-mir-9a, ame-mir-9b, dme-let-7, dme-mir-1, dme-mir-100, dme-mir-12, dme-mir-133, dme-mir-137, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-190, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-279, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-317, dme-mir-34, dme-mir-375, dme-mir-7, dme-mir-79, dme-mir-927, dme-mir-92a, dme-mir-92b, dme-mir-932, dme-mir-9a, dme-mir-9b,

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11 The microRNA toolkit of insects
Ylla G, Fromm B, Piulachs MD, Belles X
Sci Rep (2016) 6:37736
score: 1

Other hairpins from this paper: ame-mir-10, ame-mir-1006, ame-mir-1175, ame-mir-12, ame-mir-133, ame-mir-137, ame-mir-13a, ame-mir-13b, ame-mir-193, ame-mir-2-1, ame-mir-2-2, ame-mir-2-3, ame-mir-210, ame-mir-276, ame-mir-29b, ame-mir-2b, ame-mir-3049, ame-mir-306, ame-mir-316, ame-mir-317, ame-mir-31a, ame-mir-375, ame-mir-3770, ame-mir-6012, ame-mir-6037, ame-mir-71, ame-mir-750, ame-mir-932, ame-mir-971, ame-mir-989, ame-mir-9a, ame-mir-9b, ame-mir-9c, api-mir-10, api-mir-137, api-mir-13a, api-mir-210, api-mir-276, api-mir-29, api-mir-2a, api-mir-2b, api-mir-2c, api-mir-3049, api-mir-306, api-mir-316, api-mir-317, api-mir-71, api-mir-971, api-mir-9a, api-mir-9b, bmo-mir-10, bmo-mir-1175, bmo-mir-12, bmo-mir-133, bmo-mir-137, bmo-mir-13a, bmo-mir-13b, bmo-mir-210, bmo-mir-276, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-306a, bmo-mir-306b, bmo-mir-31, bmo-mir-316, bmo-mir-317, bmo-mir-375, bmo-mir-71, bmo-mir-750, bmo-mir-932, bmo-mir-970, bmo-mir-989a, bmo-mir-989b, bmo-mir-9a, bmo-mir-9b, bmo-mir-9c, bmo-mir-9d, dme-mir-10, dme-mir-1006, dme-mir-1007, dme-mir-12, dme-mir-133, dme-mir-137, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-193, dme-mir-210, dme-mir-276a, dme-mir-276b, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-306, dme-mir-309, dme-mir-316, dme-mir-317, dme-mir-31a, dme-mir-31b, dme-mir-375, dme-mir-932, dme-mir-970, dme-mir-971, dme-mir-989, dme-mir-9a, dme-mir-9b, dme-mir-9c, lmi-mir-10, lmi-mir-210, lmi-mir-276, lmi-mir-9a, tca-mir-10, tca-mir-1175, tca-mir-12, tca-mir-133, tca-mir-137, tca-mir-13a, tca-mir-13b, tca-mir-193, tca-mir-2-1, tca-mir-2-2, tca-mir-2-3, tca-mir-210, tca-mir-276, tca-mir-29, tca-mir-3049, tca-mir-309a, tca-mir-309b, tca-mir-309c, tca-mir-31, tca-mir-316, tca-mir-317, tca-mir-375, tca-mir-6012, tca-mir-71, tca-mir-750, tca-mir-932, tca-mir-970, tca-mir-971b, tca-mir-989, tca-mir-9a, tca-mir-9b, tca-mir-9c, tca-mir-9d, tca-mir-9e,

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