1 Induction of miR-3648 Upon ER Stress and Its Regulatory Role in Cell Proliferation
Rashid F, Awan HM, Shah A, Chen L, Shan G
Int J Mol Sci (2017) 18
score: 197

Other hairpins from this paper: hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, hsa-mir-211, hsa-mir-216b, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-939,

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2 Assessment of differentially expressed plasma microRNAs in nonsyndromic cleft palate and nonsyndromic cleft lip with cleft palate
Li J, Zou J, Li Q, Chen L, Gao Y, Yan H, Zhou B, Li J
Oncotarget (2016) 7:86266-86279
score: 21

Other hairpins from this paper: hsa-mir-1260a, hsa-mir-1304, hsa-mir-340, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-494, hsa-mir-877,

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3 APP intracellular domain acts as a transcriptional regulator of miR-663 suppressing neuronal differentiation
Shu R, Wong W, Ma QH, Yang ZZ, Zhu H, Liu FJ, Wang P, Ma J, Yan S, Polo JM, Bernard CC, Stanton LW, Dawe GS, Xiao ZC
Cell Death Dis (2015) 6:e1651
score: 19

Other hairpins from this paper: hsa-let-7a-1, hsa-mir-193a, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-3910-1, hsa-mir-3910-2, hsa-mir-574, hsa-mir-595, hsa-mir-633, hsa-mir-663a, hsa-mir-663b,

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4 Dynamic changes in global microRNAome and transcriptome reveal complex miRNA-mRNA regulated host response to Japanese Encephalitis Virus in microglial cells
Kumari B, Jain P, Das S, Ghosal S, Hazra B, Trivedi AC, Basu A, Chakrabarti J, Vrati S, Banerjee A
Sci Rep (2016) 6:20263
score: 11

Other hairpins from this paper: hsa-mir-126, hsa-mir-128-1, hsa-mir-128-2, hsa-mir-129-1, hsa-mir-129-2, hsa-mir-130b, hsa-mir-132, hsa-mir-145, hsa-mir-149, hsa-mir-196a-1, hsa-mir-196a-2, hsa-mir-196b, hsa-mir-197, hsa-mir-222, hsa-mir-26b, hsa-mir-3148, hsa-mir-3180-1, hsa-mir-3180-2, hsa-mir-3180-3, hsa-mir-3180-4, hsa-mir-3180-5, hsa-mir-34c, hsa-mir-3622a, hsa-mir-3622b, hsa-mir-3646, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-374b, hsa-mir-4470, hsa-mir-4672, hsa-mir-4690, hsa-mir-572, hsa-mir-7-1, hsa-mir-7-2, hsa-mir-7-3, hsa-mir-885, hsa-mir-9-1, hsa-mir-9-2, hsa-mir-9-3,

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5 Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease
Baillie JK, Arner E, Daub C, De Hoon M, Itoh M, Kawaji H, Lassmann T, Carninci P, Forrest AR, Hayashizaki Y, FANTOM Consortium., Faulkner GJ, Wells CA, Rehli M, Pavli P, Summers KM, Hume DA
PLoS Genet (2017) 13:e1006641
score: 11

Other hairpins from this paper: hsa-mir-146a, hsa-mir-155, hsa-mir-21, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-4741,

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6 Genome wide DNA differential methylation regions in colorectal cancer patients in relation to blood related family members, obese and non-obese controls - a preliminary report
Shiao SPK, Xiao H, Dong L, Wang X, Liu K, She J, Shi H
Oncotarget (2018) 9:25557-25571
score: 8

Other hairpins from this paper: hsa-mir-1247, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-4285,

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7 Human Ribosomal RNA-Derived Resident MicroRNAs as the Transmitter of Information upon the Cytoplasmic Cancer Stress
Yoshikawa M, Fujii YR
Biomed Res Int (2016) 2016:7562085
score: 7

Other hairpins from this paper: hsa-mir-1268a, hsa-mir-1268b, hsa-mir-1275, hsa-mir-206, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-4466, hsa-mir-4488, hsa-mir-4492, hsa-mir-4508, hsa-mir-4516, hsa-mir-663a, hsa-mir-663b, hsa-mir-6724-1, hsa-mir-6724-2, hsa-mir-6724-3, hsa-mir-6724-4,

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8 Differences in molecular evolutionary rates among microRNAs in the human and chimpanzee genomes
Santpere G, Lopez-Valenzuela M, Petit-Marty N, Navarro A, Espinosa-Parrilla Y
BMC Genomics (2016) 17:528
score: 4

Other hairpins from this paper: hsa-mir-1178, hsa-mir-1200, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-3691, hsa-mir-4267, hsa-mir-4507, hsa-mir-4686, ppy-mir-1178, ppy-mir-1200, ptr-mir-1178,

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9 Biologically active constituents of the secretome of human W8B2<sup>+</sup> cardiac stem cells
Nie S, Wang X, Sivakumaran P, Chong MMW, Liu X, Karnezis T, Bandara N, Takov K, Nowell CJ, Wilcox S, Shambrook M, Hill AF, Harris NC, Newcomb AE, Strappe P, Shayan R, Hernández D, Clarke J, Hanssen E, Davidson SM, Dusting GJ, Pébay A, Ho JWK, Williamson
Sci Rep (2018) 8:1579
score: 3

Other hairpins from this paper: hsa-mir-1244-1, hsa-mir-1244-2, hsa-mir-1244-3, hsa-mir-1244-4, hsa-mir-132, hsa-mir-146a, hsa-mir-210, hsa-mir-3615, hsa-mir-3648-1, hsa-mir-3648-2,

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10 The sequence structures of human microRNA molecules and their implications
Fang Z, Du R, Edwards A, Flemington EK, Zhang K
PLoS One (2013) 8:e54215
score: 3

Other hairpins from this paper: hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, hsa-mir-10b, hsa-mir-155, hsa-mir-15a, hsa-mir-15b, hsa-mir-16-1, hsa-mir-16-2, hsa-mir-21, hsa-mir-3124, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-378d-1, hsa-mir-378d-2, hsa-mir-516a-1, hsa-mir-516a-2,

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11 Microbial Signatures Associated with Oropharyngeal and Oral Squamous Cell Carcinomas
Banerjee S, Tian T, Wei Z, Peck KN, Shih N, Chalian AA, O'Malley BW, Weinstein GS, Feldman MD, Alwine J, Robertson ES
Sci Rep (2017) 7:4036
score: 2

Other hairpins from this paper: hsa-mir-3648-1, hsa-mir-3648-2,

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12 MicroRNA Expression Profile in the Prenatal Amniotic Fluid Samples of Pregnant Women with Down Syndrome
Karaca E, Aykut A, Ertürk B, Durmaz B, Güler A, Büke B, Yeniel AÖ, Ergenoğlu AM, Özkınay F, Özeren M, Kazandı M, Akercan F, Sağol S, Gündüz C, Çoğulu Ö
Balkan Med J (2018) 35:163-166
score: 1

Other hairpins from this paper: hsa-let-7c, hsa-mir-125a, hsa-mir-125b-1, hsa-mir-125b-2, hsa-mir-155, hsa-mir-3118-1, hsa-mir-3118-2, hsa-mir-3118-3, hsa-mir-3118-4, hsa-mir-3156-1, hsa-mir-3156-2, hsa-mir-3156-3, hsa-mir-3197, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-4327, hsa-mir-4759, hsa-mir-4760, hsa-mir-548x, hsa-mir-802, hsa-mir-99a,

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13 ZSCAN5B and primate-specific paralogs bind RNA polymerase III genes and extra-TFIIIC (ETC) sites to modulate mitotic progression
Sun Y, Zhang H, Kazemian M, Troy JM, Seward C, Lu X, Stubbs L
Oncotarget (2016) 7:72571-72592
score: 1

Other hairpins from this paper: hsa-mir-3648-1, hsa-mir-3648-2,

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14 Malaria infected red blood cells release small regulatory RNAs through extracellular vesicles
Babatunde KA, Mbagwu S, Hernández-Castañeda MA, Adapa SR, Walch M, Filgueira L, Falquet L, Jiang RHY, Ghiran I, Mantel PY
Sci Rep (2018) 8:884
score: 1

Other hairpins from this paper: hsa-mir-103a-1, hsa-mir-103a-2, hsa-mir-137, hsa-mir-3648-1, hsa-mir-3648-2, hsa-mir-451a, hsa-mir-486-1, hsa-mir-486-2, hsa-mir-663a, hsa-mir-663b, hsa-mir-92a-1, hsa-mir-92a-2,

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