1 Evidence for post-transcriptional regulation of clustered microRNAs in Drosophila
Ryazansky SS, Gvozdev VA, Berezikov E
BMC Genomics (2011) 12:371
score: 10

Other hairpins from this paper: dme-let-7, dme-mir-100, dme-mir-12, dme-mir-125, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-275, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2c, dme-mir-304, dme-mir-305, dme-mir-306, dme-mir-310, dme-mir-34, dme-mir-6-1, dme-mir-960, dme-mir-983-1, dme-mir-983-2, dme-mir-991, dme-mir-992,

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2 The miRNA pathway controls rapid changes in activity-dependent synaptic structure at the Drosophila melanogaster neuromuscular junction
Nesler KR, Sand RI, Symmes BA, Pradhan SJ, Boin NG, Laun AE, Barbee SA
PLoS One (2013) 8:e68385
score: 6

Other hairpins from this paper: dme-let-7, dme-mir-1, dme-mir-12, dme-mir-124, dme-mir-283, dme-mir-284, dme-mir-285, dme-mir-289, dme-mir-304, dme-mir-310, dme-mir-314, dme-mir-8, dme-mir-958, dme-mir-9a,

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3 Genome-wide analysis of the maternal-to-zygotic transition in Drosophila primordial germ cells
Siddiqui NU, Li X, Luo H, Karaiskakis A, Hou H, Kislinger T, Westwood JT, Morris Q, Lipshitz HD
Genome Biol (2012) 13:R11
score: 5

Other hairpins from this paper: dme-mir-1, dme-mir-10, dme-mir-11, dme-mir-13b-1, dme-mir-274, dme-mir-283, dme-mir-2a-2, dme-mir-309, dme-mir-8, dme-mir-92a,

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4 Selection Against Maternal microRNA Target Sites in Maternal Transcripts
Marco A
G3 (Bethesda) (2015) 5:2199-2207
score: 4

Other hairpins from this paper: dme-bantam, dme-let-7, dme-mir-10, dme-mir-1010, dme-mir-1012, dme-mir-11, dme-mir-13b-2, dme-mir-14, dme-mir-184, dme-mir-263a, dme-mir-276a, dme-mir-277, dme-mir-279, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2b-2, dme-mir-305, dme-mir-306, dme-mir-310, dme-mir-311, dme-mir-312, dme-mir-313, dme-mir-318, dme-mir-31a, dme-mir-33, dme-mir-34, dme-mir-3644, dme-mir-4941, dme-mir-4944, dme-mir-4963, dme-mir-4967, dme-mir-4972, dme-mir-4979, dme-mir-4982, dme-mir-4985, dme-mir-4986, dme-mir-8, dme-mir-92a, dme-mir-92b, dme-mir-956, dme-mir-970, dme-mir-995, dme-mir-999, dme-mir-9a, dme-mir-9b, dme-mir-9c,

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5 Dg-Dys-Syn1 signaling in Drosophila regulates the microRNA profile
Marrone AK, Edeleva EV, Kucherenko MM, Hsiao NH, Shcherbata HR
BMC Cell Biol (2012) 13:26
score: 4

Other hairpins from this paper: dme-mir-1003, dme-mir-1013, dme-mir-1017, dme-mir-124, dme-mir-137, dme-mir-190, dme-mir-193, dme-mir-252, dme-mir-274, dme-mir-283, dme-mir-312, dme-mir-313, dme-mir-315, dme-mir-34, dme-mir-927, dme-mir-92a, dme-mir-956, dme-mir-959, dme-mir-962, dme-mir-970, dme-mir-975, dme-mir-980, dme-mir-984, dme-mir-986,

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6 Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi
Mead EA, Tu Z
BMC Genomics (2008) 9:244
score: 3

Other hairpins from this paper: aae-let-7, aae-mir-12, aae-mir-14, aae-mir-210, aae-mir-277, aae-mir-281, aae-mir-283, aae-mir-2a, aae-mir-2b, aae-mir-2c, aae-mir-306, aae-mir-34, aae-mir-375, aae-mir-79, aae-mir-8, aae-mir-981, aae-mir-989, aae-mir-996, aae-mir-9a-1, aae-mir-9a-2, aae-mir-9b, aga-let-7, aga-mir-12, aga-mir-14, aga-mir-2-1, aga-mir-2-2, aga-mir-210, aga-mir-277, aga-mir-281, aga-mir-283, aga-mir-2b, aga-mir-2c, aga-mir-306, aga-mir-34, aga-mir-375, aga-mir-79, aga-mir-8, aga-mir-981, aga-mir-989, aga-mir-996, aga-mir-9a, aga-mir-9b, dme-let-7, dme-mir-12, dme-mir-14, dme-mir-210, dme-mir-277, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-304, dme-mir-306, dme-mir-34, dme-mir-375, dme-mir-79, dme-mir-8, dme-mir-981, dme-mir-989, dme-mir-996, dme-mir-9a, dme-mir-9b,

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7 Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila
Gu J, Fu H, Zhang X, Li Y
BMC Bioinformatics (2007) 8:432
score: 2

Other hairpins from this paper: dme-let-7, dme-mir-10, dme-mir-12, dme-mir-133, dme-mir-219, dme-mir-263a, dme-mir-274, dme-mir-281-2, dme-mir-282, dme-mir-283, dme-mir-285, dme-mir-286, dme-mir-2a-2, dme-mir-2c, dme-mir-305, dme-mir-309, dme-mir-310, dme-mir-311, dme-mir-316, dme-mir-31a, dme-mir-31b, dme-mir-34, dme-mir-5, dme-mir-7, dme-mir-79, dme-mir-8, dme-mir-9a, dme-mir-9c,

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8 Computational and transcriptional evidence for microRNAs in the honey bee genome
Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
Genome Biol (2007) 8:R97
score: 1

Other hairpins from this paper: ame-let-7, ame-mir-1-1, ame-mir-1-2, ame-mir-100, ame-mir-12, ame-mir-133, ame-mir-137, ame-mir-13a, ame-mir-13b, ame-mir-190, ame-mir-2-1, ame-mir-2-2, ame-mir-2-3, ame-mir-275, ame-mir-276, ame-mir-277, ame-mir-279a, ame-mir-279b, ame-mir-279c, ame-mir-279d, ame-mir-283, ame-mir-2b, ame-mir-305, ame-mir-317, ame-mir-34, ame-mir-375, ame-mir-7, ame-mir-71, ame-mir-79, ame-mir-927a, ame-mir-927b, ame-mir-92a, ame-mir-92b-1, ame-mir-92b-2, ame-mir-92c, ame-mir-932, ame-mir-9a, ame-mir-9b, dme-let-7, dme-mir-1, dme-mir-100, dme-mir-12, dme-mir-133, dme-mir-137, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-190, dme-mir-275, dme-mir-276a, dme-mir-276b, dme-mir-277, dme-mir-279, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-305, dme-mir-317, dme-mir-34, dme-mir-375, dme-mir-7, dme-mir-79, dme-mir-927, dme-mir-92a, dme-mir-92b, dme-mir-932, dme-mir-9a, dme-mir-9b,

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9 Sex-biased expression of microRNAs in Drosophila melanogaster
Marco A
Open Biol (2014) 4:140024
score: 1

Other hairpins from this paper: dme-mir-13b-2, dme-mir-184, dme-mir-276a, dme-mir-276b, dme-mir-281-1, dme-mir-281-2, dme-mir-283, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-2c, dme-mir-310, dme-mir-311, dme-mir-312, dme-mir-313, dme-mir-314, dme-mir-92a, dme-mir-92b, dme-mir-983-1, dme-mir-983-2, dme-mir-985, dme-mir-989, dme-mir-993, dme-mir-994, dme-mir-995, dme-mir-997, dme-mir-9a, dme-mir-9b, dme-mir-9c,

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