miRBase entry: mmu-mir-186

Stem-loop mmu-mir-186


Accession
MI0000228
Symbol
MGI: Mir186
Description
Mus musculus mmu-mir-186 precursor miRNA
Gene family
MIPF0000109; mir-186

Literature search
34 open access papers mention mmu-mir-186
(222 sentences)

Sequence

238209 reads, 1538 reads per million, 107 experiments
acuuucCAAAGAAUUCUCCUUUUGGGCUuucucauuuuauuuuaaGCCCUAAGGUGAAUUUUUUGGGaagu
((((((((((((((((.((((..((((((..............)))))).)))).))))))))))))))))

Structure
                U    UU      ucucau 
acuuucCAAAGAAUUC CCUU  GGGCUu      u
|||||||||||||||| ||||  ||||||       
ugaaGGGUUUUUUAAG GGAA  CCCGaa      u
                U    -U      uuuuau 


Annotation confidence High
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Comments
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].

Genome context
chr3: 157544279-157544349 [+]

Database links

Mature mmu-miR-186-5p

Accession MIMAT0000215
Description Mus musculus mmu-miR-186-5p mature miRNA
Sequence 7 - CAAAGAAUUCUCCUUUUGGGCU - 28
Evidence experimental
cloned [1-3], Illumina [4-5]
Database links
Predicted targets

Mature mmu-miR-186-3p

Accession MIMAT0004540
Description Mus musculus mmu-miR-186-3p mature miRNA
Sequence 46 - GCCCUAAGGUGAAUUUUUUGGG - 67
Evidence experimental
cloned [3], Illumina [4-5]
Database links
Predicted targets

References

  1. PubMed ID: 12554860
    Numerous microRNPs in neuronal cells containing novel microRNAs
    "Dostie J, Mourelatos Z, Yang M, Sharma A, Dreyfuss G"
    "RNA (2003) 9:180-186

  2. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  3. PubMed ID: 12554859
    New microRNAs from mouse and human
    "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
    "RNA (2003) 9:175-179

  4. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  5. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009