Stem-loop mmu-mir-206

Accession

MI0000249

Symbol

MGI: Mir206

Description

Mus musculus mmu-mir-206 precursor miRNA

Literature search

193 open access papers mention mmu-mir-206
(2338 sentences)

Sequence

563617 reads, 2108 reads per million, 83 experiments

ccaggccACAUGCUUCUUUAUAUCCUCAUAgauaucucagcacuaUGGAAUGUAAGGAAGUGUGUGGuuuugg
(((((((((((((((((((((((.(.(((((...........)))))).)))))))))))))))))).)))))

Structure

     -                  C U     auau 
ccagg ccACAUGCUUCUUUAUAU C CAUAg    c
||||| |||||||||||||||||| | |||||    u
gguuu GGUGUGUGAAGGAAUGUA G GUauc    c
     u                  A -     acga 

Annotation confidence Not enough data

Genome context

chr1: 20679010-20679082 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-206

Mature mmu-miR-206-5p

• Accession: MIMAT0017004
• Description: Mus musculus mmu-miR-206-5p mature miRNA
• Sequence: 8 - ACAUGCUUCUUUAUAUCCUCAUA - 30
• Evidence: experimental ; Illumina [4]

Mature mmu-miR-206-3p

• Accession: MIMAT0000239
• Description: Mus musculus mmu-miR-206-3p mature miRNA
• Sequence: 46 - UGGAAUGUAAGGAAGUGUGUGG - 67
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12554859
   New microRNAs from mouse and human
   "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
   "RNA (2003) 9:175-179


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009