miRBase entry: cel-mir-270

Stem-loop cel-mir-270


Accession
MI0000350
Description
Caenorhabditis elegans cel-mir-270 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
gucgcuagccucuuuaccugccuacacaccuuucugccuacguggcacauugguaggcaagagGGCAUGAUGUAGCAGUGGAGauggacugccac
...((.(((((((((((.(((.(((((((((((.(((((((...........))))))).)))))..)).)))))))))))))).)).))))...

Structure
guc  u  -  -       c   c    -  --     c       gugg 
   gc ag cc ucuuuac ugc uaca ca  ccuuu ugccuac    c
   || || || ||||||| ||| |||| ||  ||||| |||||||    a
   cg uc gg aGAGGUG ACG AUGU GU  GGgag acggaug    c
cac  -  a  u       -   -    A  AC     a       guua 


Annotation confidence Not enough data
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Comments
This sequence was predicted by computational approaches and validated using a PCR amplification protocol.

Genome context
chrIV: 3258455-3258549 [-]

Database links

Mature cel-miR-270

Accession MIMAT0000326
Description Caenorhabditis elegans cel-miR-270 mature miRNA
Sequence 64 - GGCAUGAUGUAGCAGUGGAG - 83
Evidence experimental
PCR [1]

References

  1. PubMed ID: 12769849
    Computational and experimental identification of C. elegans microRNAs
    "Grad Y, Aach J, Hayes GD, Reinhart BJ, Church GM, Ruvkun G, Kim J"
    "Mol Cell (2003) 11:1253-1263