Accession
MI0000384
Description
Drosophila melanogaster
dme-mir-288 precursor miRNA
Sequence
2
reads,
2
reads per million, 2 experiments
cggccaugucguaauuagcggagcacggcaucgccggcgauaauuaaugacgguggucacguuggUUUCAUGUCGAUUUCAUUUCAUGacacggccg
(((((.((((((....((.((((..((((((.(((((((........((((....)))))))))))...)))))).)))).))..)))))).)))))
(((((.((((((....((.((((..((((((.(((((((........((((....)))))))))))...)))))).)))).))..)))))).)))))
Structure
a aauu c ca --c auaauuaa g
cggcc ugucgu ag ggag cggcau gccggcg ugac g
||||| |||||| || |||| |||||| ||||||| ||||
gccgg acaGUA UU CUUU GCUGUA Ugguugc acug u
c --CU A -A CUU -------- g
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This sequence is computationally predicted based on conservation in D. pseudoobscura. The precise 5' or 3' ends are unknown. Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed.
Genome context
chr2L: 20618366-20618462 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dme-mir-288
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-288-3p
| Accession | MIMAT0000363 |
| Description | Drosophila melanogaster dme-miR-288-3p mature miRNA |
| Sequence | 66 - UUUCAUGUCGAUUUCAUUUCAUG - 88 |
| Evidence |
experimental
Northern [1] |
References
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