miRBase entry: cbr-mir-73a

Stem-loop cbr-mir-73a


Accession
MI0000512
Description
Caenorhabditis briggsae cbr-mir-73a precursor miRNA
Gene family
MIPF0000276; mir-73


Sequence

cggucccucaaacaaccgagcuuccccgucaagccacagcuaucucugacauugcUGGCAAGAUGUUGGCAGUUCAGUuguaugacggagacca
.(((((((((.(((((.(((((.((.((((..((((..((.............))))))..))))..)).))))).))))).))).)).)))).

Structure
c    -  -   a     c     u  -c    aa    ca  uaucu 
 gguc cc uca acaac gagcu cc  cguc  gcca  gc     c
 |||| || ||| ||||| ||||| ||  ||||  ||||  ||     u
 ccag gg agu uguUG CUUGA GG  GUAG  CGGU  cg     g
a    a  c   a     A     C  UU    AA    --  uuaca 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context
chrX: 4426887-4426980 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cbr-mir-73a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbr-miR-73a

Accession MIMAT0000482
Description Caenorhabditis briggsae cbr-miR-73a mature miRNA
Sequence 56 - UGGCAAGAUGUUGGCAGUUCAGU - 78
Evidence not_experimental

References

  1. PubMed ID: 11679671
    An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
    "Lau NC, Lim LP, Weinstein EG, Bartel DP"
    "Science (2001) 294:858-862