Stem-loop sequence rno-mir-347

Accession

MI0000635 (change log)

Description

Rattus norvegicus miR-347 stem-loop

Literature search

9 open access papers mention rno-mir-347
(18 sentences)

Stem-loop

   -    -    -     ug   g     c  g    uca       uc 
5'  gagc cccu gcugg  ggc cgggg gg gguu   ggugguc  g
    |||| |||| |||||  ||| ||||| || ||||   |||||||  c
3'  cuug gggg cgacc  cug gucuc cu ucag   ccgccgg  g
   c    a    u     cg   g     c  g    --c       ug 

Deep sequencing

4 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Comments

Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1].

Database links

• EntrezGene:Mir347
• miRBase Tracker:MI0000635

Mature sequence rno-miR-347

• Accession: MIMAT0000598
• Sequence: 61 - ugucccucugggucgccca - 79
• Evidence: experimental; cloned [1]
• Predicted targets:
  • TargetScanVert:rno-miR-347
  • miRDB:rno-miR-347
  • microrna.org:rno-miR-347

References

1. PMID:14691248 "Identification of many microRNAs that copurify with polyribosomes in mammalian neurons" Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G Proc Natl Acad Sci U S A. 101:360-365(2004).