Stem-loop mmu-mir-135b

Accession

MI0000646

Symbol

MGI: Mir135b

Description

Mus musculus mmu-mir-135b precursor miRNA

Gene family

MIPF0000028; mir-135

Literature search

79 open access papers mention mmu-mir-135b
(461 sentences)

Sequence

51416 reads, 1108 reads per million, 55 experiments

cgcucugcuguggccUAUGGCUUUUCAUUCCUAUGUGAuugcugcuccgaacucAUGUAGGGCUAAAAGCCAUGGGcuacagugaggggcaagcucc
.((((((((((((((((((((((((...(((((((((((((......)))..))))))))))..)))))))))))))))))))..))))).......

Structure

------c     --                   CAU          --   cu 
       gcucu  gcuguggccUAUGGCUUUU   UCCUAUGUGA  uug  g
       |||||  |||||||||||||||||||   ||||||||||  |||   
       cgggg  ugacaucGGGUACCGAAAA   GGGAUGUAcu  agc  c
ccucgaa     ag                   -UC          ca   cu 

Annotation confidence High

Genome context

chr1: 132198088-132198184 [+]

Mature mmu-miR-135b-5p

• Accession: MIMAT0000612
• Description: Mus musculus mmu-miR-135b-5p mature miRNA
• Sequence: 16 - UAUGGCUUUUCAUUCCUAUGUGA - 38
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-135b-3p

• Accession: MIMAT0017044
• Description: Mus musculus mmu-miR-135b-3p mature miRNA
• Sequence: 55 - AUGUAGGGCUAAAAGCCAUGGG - 76
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009