miRBase entry: mmu-mir-211

Stem-loop mmu-mir-211


Accession
MI0000708
Symbol
MGI: Mir211
Description
Mus musculus mmu-mir-211 precursor miRNA
Gene family
MIPF0000042; mir-204

Literature search
44 open access papers mention mmu-mir-211
(493 sentences)

Sequence

976 reads, 29 reads per million, 51 experiments
cugcuuggaccugugaccugugggcUUCCCUUUGUCAUCCUUUGCCUaggccucugagugagGCAAGGACAGCAAAGGGGGGCucaguggucaccucuacugcaga
((((.((((...((((((..(((((((((((((((..(((((.((((..((......)).)))))))))..)))))))))))))))..)))))).))))..)))).

Structure
-    -u    ccu      ug               CA     U    ag  cu 
 cugc  ugga   gugacc  ugggcUUCCCUUUGU  UCCUU GCCU  gc  c
 ||||  ||||   ||||||  |||||||||||||||  ||||| ||||  ||   
 gacg  aucu   cacugg  acuCGGGGGGAAACG  AGGAA CGga  ug  u
a    uc    --c      ug               AC     -    -g  ag 


Annotation confidence High
Do you think this miRNA is real?
Comments
Mouse mir-211 is predicted [2] based on homology to a reported miR from human (MIR:MI0000287) [1]. Its expression has not been verified in mouse. The mature miR differs from the human sequence at a single base. This sequence maps to mouse chromosome 7.

Genome context
chr7: 64205806-64205911 [+]

Database links

Mature mmu-miR-211-5p

Accession MIMAT0000668
Description Mus musculus mmu-miR-211-5p mature miRNA
Sequence 26 - UUCCCUUUGUCAUCCUUUGCCU - 47
Evidence experimental
Illumina [3]
Database links
Predicted targets

Mature mmu-miR-211-3p

Accession MIMAT0017059
Description Mus musculus mmu-miR-211-3p mature miRNA
Sequence 63 - GCAAGGACAGCAAAGGGGGGC - 83
Evidence experimental
Illumina [3]
Database links
Predicted targets

References

  1. PubMed ID: 12624257
    Vertebrate microRNA genes
    "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
    "Science (2003) 299:1540

  2. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  3. PubMed ID: 15634332
    New human and mouse microRNA genes found by homology search
    "Weber MJ"
    "FEBS J (2005) 272:59-73