Stem-loop cbr-mir-72

Accession

MI0000751

Description

Caenorhabditis briggsae cbr-mir-72 precursor miRNA

Gene family

MIPF0000277; mir-72

Sequence

uggacucgcccgagcuAGGCAGAUGUUGGCAUAGCugaaugcaaaucagaaaucgaaauucgaaaaguuugaauuucgcgcgcucagcuucgccacaucgugccaugcguaggcuugagacca
(((.((((((.(.((..(((((((((.(((..((((((.(((...........(((((((((((...))))))))))).))).))))))..)))))))).))))..)).).)))..))).)))

Structure

   a   --   c a  uA    -     U   AU      a   aaaucagaaau           a 
ugg cuc  gcc g gc  GGCA GAUGU GGC  AGCuga ugc           cgaaauucgaa  
||| |||  ||| | ||  |||| ||||| |||  |||||| |||           ||||||||||| a
acc gag  cgg u cg  ccgu cuaca ccg  ucgacu gcg           gcuuuaaguuu  
   a   uu   a g  ua    g     -   cu      c   ----------c           g 

Annotation confidence Not enough data

Comments

This sequence is the predicted C. briggsae homologue of a miRNA cloned from C. elegans (MIR:MI0000043) (Uwe Ohler, pers. comm.).

Genome context

chrII: 14785974-14786096 [-]

Mature cbr-miR-72

• Accession: MIMAT0000694
• Description: Caenorhabditis briggsae cbr-miR-72 mature miRNA
• Sequence: 17 - AGGCAGAUGUUGGCAUAGC - 35
• Evidence: not_experimental

References

1. PubMed ID: 11679671
   An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
   "Lau NC, Lim LP, Weinstein EG, Bartel DP"
   "Science (2001) 294:858-862