Stem-loop cbr-lsy-6

Accession

MI0000818

Description

Caenorhabditis briggsae cbr-lsy-6 precursor miRNA

Sequence

ccacagaaugcguccaguaucaaaaucacaucaaagagaauacgguggaUUUUGUAUGAGACGCAUUCCGuggc
((((.(((((((((..(((.(((((((.((((...........))))))))))))))..))))))))).)))).

Structure

-    a         ca   u       a    aaag 
 ccac gaaugcguc  gua caaaauc cauc    a
 |||| |||||||||  ||| ||||||| ||||    g
 gguG CUUACGCAG  UAU GUUUUag gugg    a
c    C         AG   -       -    caua 

Annotation confidence Not enough data

Genome context

chrV: 10397386-10397459 [-]

Mature cbr-lsy-6

• Accession: MIMAT0000767
• Description: Caenorhabditis briggsae cbr-lsy-6 mature miRNA
• Sequence: 50 - UUUUGUAUGAGACGCAUUCCG - 70
• Evidence: not_experimental

References

1. PubMed ID: 15317971
   Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification
   "Ohler U, Yekta S, Lim LP, Bartel DP, Burge CB"
   "RNA (2004) 10:1309-1322


2. PubMed ID: 14685240
   A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans
   "Johnston RJ, Hobert O"
   "Nature (2003) 426:845-849