Stem-loop sequence cbr-lsy-6

Accession

MI0000818 (change log)

Description

Caenorhabditis briggsae lsy-6 stem-loop

Gene family

MIPF0000265; lsy-6

Stem-loop

   -    a         ca   u       a    aaag 
5'  ccac gaaugcguc  gua caaaauc cauc    a
    |||| |||||||||  ||| ||||||| ||||    g
3'  ggug cuuacgcag  uau guuuuag gugg    a
   c    c         ag   -       -    caua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CB4; GCA_000004555.3): chrV: 10397386-10397459 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0000818

Mature sequence cbr-lsy-6

• Accession: MIMAT0000767
• Sequence: 50 - uuuuguaugagacgcauuccg - 70
• Evidence: by similarity; MI0000801

References

1. PMID:14685240 "A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans" Johnston RJ, Hobert O Nature. 426:845-849(2003).
2. PMID:15317971 "Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification" Ohler U, Yekta S, Lim LP, Bartel DP, Burge CB RNA. 10:1309-1322(2004).