miRBase entry: cbr-lsy-6

Stem-loop cbr-lsy-6


Accession
MI0000818
Description
Caenorhabditis briggsae cbr-lsy-6 precursor miRNA
Gene family
MIPF0000265; lsy-6


Sequence

ccacagaaugcguccaguaucaaaaucacaucaaagagaauacgguggaUUUUGUAUGAGACGCAUUCCGuggc
((((.(((((((((..(((.(((((((.((((...........))))))))))))))..))))))))).)))).

Structure
-    a         ca   u       a    aaag 
 ccac gaaugcguc  gua caaaauc cauc    a
 |||| |||||||||  ||| ||||||| ||||    g
 gguG CUUACGCAG  UAU GUUUUag gugg    a
c    C         AG   -       -    caua 


Annotation confidence Not enough data
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Genome context
chrV: 10397386-10397459 [-]

Database links

Mature cbr-lsy-6

Accession MIMAT0000767
Description Caenorhabditis briggsae cbr-lsy-6 mature miRNA
Sequence 50 - UUUUGUAUGAGACGCAUUCCG - 70
Evidence not_experimental

References

  1. PubMed ID: 15317971
    Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification
    "Ohler U, Yekta S, Lim LP, Bartel DP, Burge CB"
    "RNA (2004) 10:1309-1322

  2. PubMed ID: 14685240
    A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans
    "Johnston RJ, Hobert O"
    "Nature (2003) 426:845-849