![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence rno-mir-100 |
||||||||
Accession | MI0000885 (change log) | |||||||
Description | Rattus norvegicus miR-100 stem-loop | |||||||
Gene family | MIPF0000033; mir-10 | |||||||
Literature search |
![]()
22 open access papers mention rno-mir-100 | |||||||
Stem-loop |
-uu c a cg uc a c ac 5' ccug g caca acc uaga cga cuugug ug c |||| | |||| ||| |||| ||| |||||| || 3' ggau c gugu ugg aucu guu gaacac ac a ugu u a au gu c - gu |
|||||||
Deep sequencing |
| |||||||
Confidence |
Annotation confidence: high
| |||||||
Genome context |
|
|||||||
Clustered miRNAs |
|
|||||||
Database links |
Mature sequence rno-miR-100-5p |
|
Accession | MIMAT0000822 |
Previous IDs | rno-miR-100 |
Sequence |
13 - aacccguagauccgaacuugug - 34 |
Deep sequencing | 1933388 reads, 495 experiments |
Evidence | experimental; cloned [1-2], Northern [1], SOLiD [3] |
Predicted targets |
|
Mature sequence rno-miR-100-3p |
|
Accession | MIMAT0017112 |
Previous IDs | rno-miR-100* |
Sequence |
48 - caagcuugugucuauaggu - 66 |
Deep sequencing | 1741 reads, 301 experiments |
Evidence | experimental; SOLiD [3] |
Predicted targets |
|
References |
|
1 |
PMID:14691248
"Identification of many microRNAs that copurify with polyribosomes in mammalian neurons"
Proc Natl Acad Sci U S A. 101:360-365(2004).
|
2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
|
3 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
|