Stem-loop rno-mir-291a

Accession

MI0000965

Description

Rattus norvegicus rno-mir-291a precursor miRNA

Gene family

MIPF0000068; mir-290

Literature search

9 open access papers mention rno-mir-291a
(30 sentences)

Sequence

54 reads, 3 reads per million, 21 experiments

ccgguguaguagcCAUCAAAGUGGAGGCCCUCUCUugggcccgagcuagAAAGUGCUUCCACUUUGUGUGCCacugcauggg
((.(((((((.((((.((((((((((((.((.(((..(((....)))))).)).)))))))))))))).)).))))))).))

Structure

  g       a  -  U            C  C   ug   c 
cc guguagu gc CA CAAAGUGGAGGC CU UCU  ggc c
|| ||||||| || || |||||||||||| || |||  |||  
gg uacguca CG GU GUUUCACCUUCG GA Aga  ucg g
  g       C  U  -            U  A   --   a 

Annotation confidence High

Comments

This sequence is the predicted rat homologue of a confirmed miRNA from mouse [1]. Its expression has not been experimentally verified in rat.

Genome context

chr1: 64538407-64538488 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from rno-mir-291a

Mature rno-miR-291a-5p

• Accession: MIMAT0000894
• Description: Rattus norvegicus rno-miR-291a-5p mature miRNA
• Sequence: 14 - CAUCAAAGUGGAGGCCCUCUCU - 35
• Evidence: not_experimental

Mature rno-miR-291a-3p

• Accession: MIMAT0000895
• Description: Rattus norvegicus rno-miR-291a-3p mature miRNA
• Sequence: 50 - AAAGUGCUUCCACUUUGUGUGCC - 72
• Evidence: not_experimental

References

1. PubMed ID: 12919684
   Embryonic stem cell-specific MicroRNAs
   "Houbaviy HB, Murray MF, Sharp PA"
   "Dev Cell (2003) 5:351-358