Stem-loop sequence osa-MIR399e

AccessionMI0001057 (change log)
DescriptionOryza sativa miR399e stem-loop
Gene family MIPF0000015; MIR399
Literature search

58 open access papers mention osa-MIR399e
(227 sentences)

   aca      a c   ug       c         uuc    c  ca  --       ug 
5'    ugcauu c ggg  agucuuc uuggcagug   gaau gg  gu  accgguc  c
      |||||| | |||  ||||||| |||||||||   |||| ||  ||  |||||||  a
3'    acguaa g ccc  uuagagg aaccgucgc   cuug cc  ua  uggcuag  a
   uca      c a   gu       a         -ca    a  ac  ac       ug 
Get sequence
Deep sequencing
8 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?

This sequence belongs to the miR399 family of miRNAs, which are predicted to target mRNAs coding for a phosphatase transporter [1].

Genome context
Coordinates (MSU7) Overlapping transcripts
Chr1: 30477612-30477729 [-]
Clustered miRNAs
< 10kb from osa-MIR399e
osa-MIR399aChr1: 30478636-30478784 [+]
osa-MIR399eChr1: 30477612-30477729 [-]
Database links

Mature sequence osa-miR399e

Accession MIMAT0000988

88 - 


 - 108

Get sequence
Deep sequencing7 reads, 2 experiments
Evidence by similarity; MI0001020