miRBase entry: ath-MIR405d

Stem-loop ath-MIR405d


Accession
MI0001077
Description
Arabidopsis thaliana ath-MIR405d precursor miRNA
Gene family
MIPF0000198; MIR405

Literature search
1 open access papers mention ath-MIR405d
(1 sentences)

Sequence

acccaucaaaugaaaugaguuauggguugacccaacucauuuuguuaaAUGAGUUGGGUCUAACCCAUAACUcauuuaaucauaaa
.........(((((((((((((((((((((((((((((((((....)))))))))))))).)))))))))))))))...))))...

Structure
acccaucaa    ---               -              u 
         auga   aaugaguuauggguu gacccaacucauuu g
         ||||   ||||||||||||||| ||||||||||||||  
         uacu   uuacUCAAUACCCAA CUGGGUUGAGUAaa u
------aaa    aau               U              u 


Annotation confidence Not enough data
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Genome context
chr4: 2789656-2789741 [-]

Database links

Mature ath-miR405d

Accession MIMAT0001008
Description Arabidopsis thaliana ath-miR405d mature miRNA
Sequence 49 - AUGAGUUGGGUCUAACCCAUAACU - 72
Evidence experimental
cloned [1]

References

  1. PubMed ID: 15258262
    Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
    "Sunkar R, Zhu JK"
    "Plant Cell (2004) 16:2001-2019