![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence ath-MIR159c |
|||||
Accession | MI0001085 (change log) | ||||
Description | Arabidopsis thaliana miR159c stem-loop | ||||
Gene family | MIPF0000010; MIR159 | ||||
Literature search |
![]()
49 open access papers mention ath-MIR159c | ||||
Stem-loop |
guguaac -c a ---caa ---uu cuaaaau c u a cu a a gcggug a 5' agaaggagcucccuuc uccaaa cgaagagga gau gaggaa g agaaucuaagag uc ugu uccuc uagag gugc uuaa a |||||||||||||||| |||||| ||||||||| ||| |||||| | |||||||||||| || ||| ||||| ||||| |||| |||| 3' uuuuccucgagggaag agguuu gcuucucuu cua cucuuu c ucuuagauucuc ag acg agggg auuuc cacg aguu g cuucuuc uu - cucuua uacau ---cucc - c c uu a a -aaaga c |
||||
Confidence |
Annotation confidence: not enough data
| ||||
Comments |
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1]. It is predicted to target mRNAs coding for MYB and TCP transcription factors. |
||||
Genome context |
|
||||
Database links |
|
Mature sequence ath-miR159c |
|
Accession | MIMAT0001015 |
Sequence |
195 - uuuggauugaagggagcuccu - 215 |
Evidence | experimental; 454 [2] |
References |
|
1 |
PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"
Mol Cell. 14:787-799(2004).
|
2 |
PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"
Genes Dev. 20:3407-3425(2006).
|