Accession
MI0001086
Description
Arabidopsis thaliana
ath-MIR319c precursor miRNA
Literature search
34 open access papers mention ath-MIR319c
(263 sentences)
(263 sentences)
Sequence
uagauauagaaggagauucuuucaguccagucauggauagaaaaagaagaggguagaaauaucugccgacucauccauccaaacacucgugguagagaaacgauaaauuuaaaccgcagugacugugugaaugaugcgggagauauuuuugauccuucuuuaucuguguUUGGACUGAAGGGAGCUCCUUcuuuuucua
((((...((((((((.((((((((((((((.((((((((....((((((.((.(((((((((((.(((..((((.(((.((..((((.(((((..(((.........)))..)))))))))..)).))).))))..))).))))))))))).)))))))))))))))).)))))))))))))).))))))))...))))
((((...((((((((.((((((((((((((.((((((((....((((((.((.(((((((((((.(((..((((.(((.((..((((.(((((..(((.........)))..)))))))))..)).))).))))..))).))))))))))).)))))))))))))))).)))))))))))))).))))))))...))))
Structure
uau a u gaaa a g g ac c c aa c ag aac
uaga agaaggag uucuuucaguccag cauggaua aagaag gg uagaaauaucu ccg ucau cau ca cacu guggu aga g
|||| |||||||| |||||||||||||| |||||||| |||||| || ||||||||||| ||| |||| ||| || |||| ||||| ||| a
aucu ucUUCCUC AGGGAAGUCAGGUU gugucuau uucuuc cu guuuuuauaga ggc agua gug gu guga cgcca uuu u
uuu G u ---- - a g gu a u ca - aa aaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1], subsequently verified in [2,3]. It is predicted to target mRNAs coding for MYB and TCP transcription factors.
Genome context
chr2: 17029701-17029899 [+]
Database links
Mature ath-miR319c
| Accession | MIMAT0001016 |
| Description | Arabidopsis thaliana ath-miR319c mature miRNA |
| Sequence | 170 - UUGGACUGAAGGGAGCUCCUU - 190 |
| Evidence |
experimental
cloned [2], Northern [2], 454 [3] |
References
|
