Stem-loop osa-MIR171h

Accession

MI0001147

Description

Oryza sativa osa-MIR171h precursor miRNA

Literature search

46 open access papers mention osa-MIR171h
(156 sentences)

Sequence

13393 reads, 110.0 reads per million, 119 experiments

agaagaagaggacauggUUUGGUAUUGUUUCGGCUCAUGucguucacacagauGUGAGCCGAACCAAUAUCACUcauguauucuucauucagagaacuucu
.(((((((((.((((((..((((((((.(((((((((((((.........))))))))))))).)))))))).)))))).)))))).)))...........

Structure

----------a   -      g      UU        U             guu 
           gaa gaagag acaugg  UGGUAUUG UUCGGCUCAUGuc   c
           ||| |||||| ||||||  |||||||| |||||||||||||   a
           cuu cuucuu uguacU  ACUAUAAC AAGCCGAGUGuag   c
ucuucaagaga   a      a      -C        C             aca 

Annotation confidence High

Genome context

4: 28482456-28482556 [+]

Mature osa-miR171h-5p

• Accession: MIMAT0055974
• Description: Oryza sativa osa-miR171h-5p mature miRNA
• Sequence: 18 - UUUGGUAUUGUUUCGGCUCAUG - 39
• Evidence: experimental ; unknown

Mature osa-miR171h-3p

• Accession: MIMAT0001077
• Description: Oryza sativa osa-miR171h-3p mature miRNA
• Sequence: 54 - GUGAGCCGAACCAAUAUCACU - 74
• Evidence: not_experimental

References

1. PubMed ID: 15258262
   Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
   "Sunkar R, Zhu JK"
   "Plant Cell (2004) 16:2001-2019