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miRBase |
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Stem-loop sequence gga-mir-153 |
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Accession | MI0001188 (change log) | ||||
Description | Gallus gallus miR-153 stem-loop | ||||
Gene family | MIPF0000050; mir-153 | ||||
Literature search |
2 open access papers mention gga-mir-153 | ||||
Stem-loop |
a g - gu -a aa 5' gcgguu ccagug ucauuuuugugau ugcagcu gu u |||||| |||||| ||||||||||||| ||||||| || a 3' ugucaa gguuac agugaaaacacug acguuga cg u g a u au cc ag |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken. |
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Genome context |
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Database links |
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Mature sequence gga-miR-153-5p |
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Accession | MIMAT0026502 |
Sequence |
15 - ucauuuuugugauguugcagcu - 36 |
Deep sequencing | 817 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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Mature sequence gga-miR-153-3p |
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Accession | MIMAT0001119 |
Sequence |
53 - uugcauagucacaaaaguga - 72 |
Deep sequencing | 37284 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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