miRBase entry: gga-mir-187

Stem-loop gga-mir-187


Accession
MI0001193
Description
Gallus gallus gga-mir-187 precursor miRNA
Gene family
MIPF0000078; mir-187

Literature search
3 open access papers mention gga-mir-187
(6 sentences)

Sequence

37605 reads, 432 reads per million, 5 experiments
aaacuauugugagaccuccGGCUACAACACAGGACAUGGGAgcuuuucugaacccUCGUGUCUUGUGUUGCAGCCagaggggcaca
.......((((...((((.((((.((((((((((((((((.(.((....)).).)))))))))))))))).)))).))))..))))

Structure
aaacuau    aga    c    A                A c  u 
       ugug   ccuc GGCU CAACACAGGACAUGGG g uu u
       ||||   |||| |||| |||||||||||||||| | ||  
       acac   ggag CCGA GUUGUGUUCUGUGCUc c ag c
-------    -gg    a    C                c a  u 


Annotation confidence High
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Genome context
chr2: 83889612-83889697 [+]

Database links

Mature gga-miR-187-3p

Accession MIMAT0001124
Description Gallus gallus gga-miR-187-3p mature miRNA
Sequence 56 - UCGUGUCUUGUGUUGCAGCC - 75
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature gga-miR-187-5p

Accession MIMAT0026507
Description Gallus gallus gga-miR-187-5p mature miRNA
Sequence 20 - GGCUACAACACAGGACAUGGGA - 41
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None:

  3. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45